Gene Caul_5305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_5305 
Symbol 
ID5897111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010333 
Strand
Start bp14838 
End bp15689 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content67% 
IMG OID641550598 
Product3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoAhydratase 
Protein accessionYP_001672084 
Protein GI167621576 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0297084 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.691461 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGCA TACCGATTTC GTCCGATCTC GTCGGGTTGG AGCTCCCCGC CACCACCCAG 
ACCTGGACCT CCAAGGACAC CATGCTCTAC GCCCTGGGCG TCGGCGGGCG ACCGGCGGAA
GACCTGGACT TCATCTATGA AGGCCGCGGC CCGAAGGTTC TGCCGACCTA TGCCGTGATC
CCGGGCGGCG GCGCCTTGGG GGGTCTGATG CGCACCGTCG ACATGCGTCT GGAGATGCTG
CTTCATGGCG AACAGTCCAT CGAGCTGTTC CGGCCCCTCC CCCCCGAAGC CAGCGTCGAG
GTGAGCGGCC GCATCACCGA GGTCTGGGAC AAGGGAAAGG CTGCCGTTCT GGGCGTCGAG
GGCGTGGCCC GCGACGCCGA CGGCGACCTT TTCCGGACCC ACGCCACGCT GTTCGTCCGC
GGCGCGGGCG GTTTCGGCGG CGAGCGCGGT CCCTCGGGCG GAGATAGCGC CGCGCCCGAC
CGGGCCCCGG ATATTACGGC CAGCTTCCAG ACCCGTCCCG AACAAGGCGC GATCTACCGG
CTGTCGGGCG ATCGCAACCC CATCCATATC GACCCGGCGT TCGCTAGGAT GGGCGGGTTC
GACGCGCCCT TCATGCACGG GCTGTGCACC TACGGCATTG TGGGTCGCGC CATCCTGCGA
GAGCTATGCG CCGACGATCC GGGCGCCTTC CATTCCTTCC AGGGCCGGTT CGCTGACCGG
GTGCTGTATG GGGACACTAT CGTCACCAAG ATCTGGCGCA CAGGCGACGG CGAGGCCATC
GTGCAGGGCG AAACCGCAGA CGGCCGTATC GTCCTGTCTC AAGCCAGGGC GAAATTCGCA
GTCCCAGCAT AG
 
Protein sequence
MTRIPISSDL VGLELPATTQ TWTSKDTMLY ALGVGGRPAE DLDFIYEGRG PKVLPTYAVI 
PGGGALGGLM RTVDMRLEML LHGEQSIELF RPLPPEASVE VSGRITEVWD KGKAAVLGVE
GVARDADGDL FRTHATLFVR GAGGFGGERG PSGGDSAAPD RAPDITASFQ TRPEQGAIYR
LSGDRNPIHI DPAFARMGGF DAPFMHGLCT YGIVGRAILR ELCADDPGAF HSFQGRFADR
VLYGDTIVTK IWRTGDGEAI VQGETADGRI VLSQARAKFA VPA