Gene Caul_5304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_5304 
Symbol 
ID5897173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010333 
Strand
Start bp14233 
End bp14808 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content68% 
IMG OID641550597 
Productcarboxymuconolactone decarboxylase 
Protein accessionYP_001672083 
Protein GI167621575 
COG category[S] Function unknown 
COG ID[COG2128] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.377989 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.661983 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCG ACGCCCCGAG GATCGACCTT CTGAGTCTGG AAGAGGCGGC GAACGCGGCC 
GGGTCGGCGG GGATTTCTGA ACAGATGGCG CCGCTCAGCG TGTTTCGCGT CCTCCTGCGG
CATCCCGCGG TGGCGGGCGA GCTTGCCTCC ACGCTCACTA CCCTCCTCTT TCGAGGCAAC
AAGCTCGACG CCCGCCTGCG CGAACTGATC ATCATGCGGA TCGGCTGGAG GACCGGCTCA
GTCTATGAGT GGACCCAGCA CTGGCGGGTG GCCCGCGGGC TCGACATTCC CGAGGCCGAC
CTGGCGGCTT CCCGTGACTG GCGGGGAGCC GCGAACCTGT CGGAGGCCGA CAGGGCTGTG
CTGCAGGCCA CCGACGACAC GCTCGATCAG GGCATGATCT CGGACGCCGC CTGGGAGGCC
TGCTGCCTCC ACCTGGCGAC GGACGCCGAG CGCATTGAGC TGGTGGTTGC GATCGGCAAC
TGGACCATGT TCTCCCAGCT CCTGAAGAGC CTGCGCATTC CGCTGGAAGA CGGTGTCGAG
GCCTGGCCGC CGGATGGCCA AGCGCCACGA ACCTGA
 
Protein sequence
MTADAPRIDL LSLEEAANAA GSAGISEQMA PLSVFRVLLR HPAVAGELAS TLTTLLFRGN 
KLDARLRELI IMRIGWRTGS VYEWTQHWRV ARGLDIPEAD LAASRDWRGA ANLSEADRAV
LQATDDTLDQ GMISDAAWEA CCLHLATDAE RIELVVAIGN WTMFSQLLKS LRIPLEDGVE
AWPPDGQAPR T