Gene Caul_5294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_5294 
Symbol 
ID5897129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010333 
Strand
Start bp2709 
End bp3515 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content72% 
IMG OID641550587 
Productintegrase family protein 
Protein accessionYP_001672073 
Protein GI167621565 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCCA TCACCCGTGC CGCGACCGCC ATCGCCGCCG TCCTCGTCCG CGAAGGGGTC 
GACTACGCCC AGAGCAAGGC GGTGTTCAGA GCGGCGCGGA AGCGGGCCGG CCTGAGCGCG
CCGCCCGAGC GCCGAGGCGG GGTGGACCGG CTGACGGTCG AGGAGGAGCT CCGCTTTCTC
GACCGGGCCT ATGCGCAGGG CGGCCGCACC GGCTTGATGC TGCAGACGCT CCTCGAAACC
GGCGCCCGCG CGTCCGAGCT GGTCCAGCTT CGGATCGAGG ACGTGAGCCT TGCCGAGCGC
GTCGTCACCA TCCGCGAGGG CAAGGGCGGC AAGCGCCGCG AAATCCCGAT CCGGCGCGAC
CTGGCCCAGC TGCTTCAGCT CCACATCGGG GCTCGGCGCG CGGGGCCGCT GTTCGCCAGC
CGCCAGCAGG GCTCCGGCCC GACGCCGCAC GTGCTCACCC GCCAGCGGAT CGGCCAGGTC
GTGCGCGAGG TGGCCCGCGA CGCCGGGATC ACCAAACGGG TCTACCCCCA CCTTCTGCGC
CACACCGTCG CCACCCGCCT GCTGGCGCTC GGCATGGACA TCACCGACCT TCAACGGTTC
CTCGGACACG AGAGCATCAC AACGACCCGT CTCTACGCCG AGACCACCGC CGCCACGCTG
CAGCGCAAGT TCGACGCCCT CACCGATCCG GCCGCCCACA CCCTCGTCGC CGTCATTCGC
CAGCGGCAGG GCGACGACGC TGCGCTGCTG GCCGCCGGTC TTCTGGCCCA GCGCCGGGCG
GAGCGGGTCA CCACTGCTGG TGCATGA
 
Protein sequence
MTAITRAATA IAAVLVREGV DYAQSKAVFR AARKRAGLSA PPERRGGVDR LTVEEELRFL 
DRAYAQGGRT GLMLQTLLET GARASELVQL RIEDVSLAER VVTIREGKGG KRREIPIRRD
LAQLLQLHIG ARRAGPLFAS RQQGSGPTPH VLTRQRIGQV VREVARDAGI TKRVYPHLLR
HTVATRLLAL GMDITDLQRF LGHESITTTR LYAETTAATL QRKFDALTDP AAHTLVAVIR
QRQGDDAALL AAGLLAQRRA ERVTTAGA