Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5439 |
Symbol | |
ID | 5873254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 6070304 |
End bp | 6071176 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641550575 |
Product | parB-like partition protein |
Protein accession | YP_001671656 |
Protein GI | 167036425 |
COG category | [K] Transcription |
COG ID | [COG1475] Predicted transcriptional regulators |
TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGTCA AGAAACGGGG TCTCGGACGT GGGTTGGATG CACTGCTCAG TGGTCCTTCC GTCAGCGCGC TCGAAGAGCA GGCTGTGAAG ATCGACCAGA AAGAACTGCA ACACCTGCCG GTCGAGTTGA TCCAGCGTGG CAAGTACCAG CCACGCCGGG ACATGGACCC GGAGGCGCTG GAAGAGCTTG CGCACTCGAT TCGCACTCAT GGCGTGATGC AGCCGATCGT GGTCCGCCCG ATCGGCGACA ACCGTTACGA GATCATCGCC GGTGAGCGCC GTTGGCGCGC CACCCAGCAG GCCGGCCTGG ACACGATCCC GGCCATGGTC CGCGAAGTGC CGGACGAAGC CGCCATCGCC ATGGCGCTGA TCGAGAACAT CCAGCGCGAA GACCTCAACC CGCTGGAAGA GGCCATGGCC CTGCAGCGTC TGCAGCAGGA ATTCGAGCTC ACCCAGCAAC AGGTGGCTGA CGCCGTTGGC AAATCGCGGG TAACCGTGGC CAACTTGCTG CGCCTGATTA CCTTGCCCGA AGCGATCAAG ACCATGCTCG CCCATGGCGA TCTGGAGATG GGCCATGCCC GTGCATTGCT CGGTCTGGAC GAAAGCCGTC AGGAGGAGGG GGCGCGTCAT GTTGTCGCAC GTGGCCTCAC CGTGCGCCAA ACCGAGGCAT TGGTTCGCCA ATGGCTCAGC GACAAACCTG ATCCGGTCGA ACAGAGCAAA CCTGATCCGG ATATCGCACG CCTTGAACAG CGGCTCGCAG AGCGCCTGGG CTCCGCCGTG CAGATCCGTC ATGGCAACAA GGGAAAAGGC CAATTGGTTA TTCGCTACAA CTCGCTTGAC GAGTTGCAAG GCGTGCTTTC TCACATCCGC TGA
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Protein sequence | MAVKKRGLGR GLDALLSGPS VSALEEQAVK IDQKELQHLP VELIQRGKYQ PRRDMDPEAL EELAHSIRTH GVMQPIVVRP IGDNRYEIIA GERRWRATQQ AGLDTIPAMV REVPDEAAIA MALIENIQRE DLNPLEEAMA LQRLQQEFEL TQQQVADAVG KSRVTVANLL RLITLPEAIK TMLAHGDLEM GHARALLGLD ESRQEEGARH VVARGLTVRQ TEALVRQWLS DKPDPVEQSK PDPDIARLEQ RLAERLGSAV QIRHGNKGKG QLVIRYNSLD ELQGVLSHIR
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