Gene PputGB1_5439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5439 
Symbol 
ID5873254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp6070304 
End bp6071176 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content62% 
IMG OID641550575 
ProductparB-like partition protein 
Protein accessionYP_001671656 
Protein GI167036425 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTCA AGAAACGGGG TCTCGGACGT GGGTTGGATG CACTGCTCAG TGGTCCTTCC 
GTCAGCGCGC TCGAAGAGCA GGCTGTGAAG ATCGACCAGA AAGAACTGCA ACACCTGCCG
GTCGAGTTGA TCCAGCGTGG CAAGTACCAG CCACGCCGGG ACATGGACCC GGAGGCGCTG
GAAGAGCTTG CGCACTCGAT TCGCACTCAT GGCGTGATGC AGCCGATCGT GGTCCGCCCG
ATCGGCGACA ACCGTTACGA GATCATCGCC GGTGAGCGCC GTTGGCGCGC CACCCAGCAG
GCCGGCCTGG ACACGATCCC GGCCATGGTC CGCGAAGTGC CGGACGAAGC CGCCATCGCC
ATGGCGCTGA TCGAGAACAT CCAGCGCGAA GACCTCAACC CGCTGGAAGA GGCCATGGCC
CTGCAGCGTC TGCAGCAGGA ATTCGAGCTC ACCCAGCAAC AGGTGGCTGA CGCCGTTGGC
AAATCGCGGG TAACCGTGGC CAACTTGCTG CGCCTGATTA CCTTGCCCGA AGCGATCAAG
ACCATGCTCG CCCATGGCGA TCTGGAGATG GGCCATGCCC GTGCATTGCT CGGTCTGGAC
GAAAGCCGTC AGGAGGAGGG GGCGCGTCAT GTTGTCGCAC GTGGCCTCAC CGTGCGCCAA
ACCGAGGCAT TGGTTCGCCA ATGGCTCAGC GACAAACCTG ATCCGGTCGA ACAGAGCAAA
CCTGATCCGG ATATCGCACG CCTTGAACAG CGGCTCGCAG AGCGCCTGGG CTCCGCCGTG
CAGATCCGTC ATGGCAACAA GGGAAAAGGC CAATTGGTTA TTCGCTACAA CTCGCTTGAC
GAGTTGCAAG GCGTGCTTTC TCACATCCGC TGA
 
Protein sequence
MAVKKRGLGR GLDALLSGPS VSALEEQAVK IDQKELQHLP VELIQRGKYQ PRRDMDPEAL 
EELAHSIRTH GVMQPIVVRP IGDNRYEIIA GERRWRATQQ AGLDTIPAMV REVPDEAAIA
MALIENIQRE DLNPLEEAMA LQRLQQEFEL TQQQVADAVG KSRVTVANLL RLITLPEAIK
TMLAHGDLEM GHARALLGLD ESRQEEGARH VVARGLTVRQ TEALVRQWLS DKPDPVEQSK
PDPDIARLEQ RLAERLGSAV QIRHGNKGKG QLVIRYNSLD ELQGVLSHIR