Gene PputGB1_5436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5436 
Symbol 
ID5873251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp6068459 
End bp6068716 
Gene Length258 bp 
Protein Length85 aa 
Translation table11 
GC content56% 
IMG OID641550572 
ProductF0F1 ATP synthase subunit C 
Protein accessionYP_001671653 
Protein GI167036422 
COG category[C] Energy production and conversion 
COG ID[COG0636] F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K 
TIGRFAM ID[TIGR01260] ATP synthase, F0 subunit c 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACTG TAGTTGGTCT GACCGCTATC GCTGTTGCTC TGCTGATCGG CCTGGGTGCT 
CTGGGTACCG CCATTGGTTT CGGCCTGCTG GGCGGCAAAT TCCTGGAAGG CGCTGCTCGT
CAGCCAGAAA TGGTTCCGAT GCTGCAGGTC AAAATGTTCA TCGTTGCCGG TCTGCTCGAC
GCCGTAACCA TGATCGGTGT TGGTATCGCT CTGTTCTTCA CCTTCGCGAA TCCGTTCGTT
GGTCAGATCG CCGGCTAA
 
Protein sequence
METVVGLTAI AVALLIGLGA LGTAIGFGLL GGKFLEGAAR QPEMVPMLQV KMFIVAGLLD 
AVTMIGVGIA LFFTFANPFV GQIAG