| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5433 |
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| Symbol | |
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| ID | 5873248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 6065817 |
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| End bp | 6067361 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641550569 |
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| Product | F0F1 ATP synthase subunit alpha |
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| Protein accession | YP_001671650 |
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| Protein GI | 167036419 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
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| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAAC TCAATCCTTC CGAAATTAGT GAAATCATCA AGGGCCGCAT CGACAACCTC
GATGTGAGCT CCCAAGCCCG TAACGAAGGT ACCGTTGTTT CGGTTTCCGA CGGTATCGTG
CGGATCCACG GTCTGGCCGA CGTCATGTAC GGCGAAATGA TCGAGTTCCC GGGCGGCGTC
TACGGCATGG CCCTGAACCT GGAGCAAGAC TCCGTAGGTG CAGTGATCCT GGGTGCATAC
GACACCCTCG CCGAAGGCAT GAGCGCCAAG TGCACCGGCC GCATCCTGGA AGTTCCGGTT
GGTAAGGAAC TGCTGGGTCG CGTCGTCGAC GCACTGGGCA ACCCGATCGA CGGCAAAGGT
CCTCTGGGCA ACACCCAGAC CGACGCGGTC GAAAAAGTTG CTCCAGGCGT GATCTGGCGT
AAGTCGGTAG ACCAGCCTGT ACAGACTGGC TACAAATCCG TCGACGCCAT GATCCCAGTC
GGCCGTGGCC AGCGTGAGCT GATCATTGGC GACCGTCAGA TCGGCAAGAC CGCCATGGCC
ATCGACGCCA TCATCAACCA GAAAGACTCC GGTATTTTCT GTGTTTATGT TGCTGTCGGC
CAGAAGCGTT CCACCGTTGC CAACATCGTT CGCAAGCTGG AAGAAAACGG CGCCCTGGCC
AACACCATCG TGGTAGTTGC CAGTGCTTCG GAATCCGCCG CACTGCAATT CCTGGCGCCA
TACGCCGGTT GCACCATGGG CGAGTTCTTC CGTGACCGCG GTGAAGACGC CCTGATCGTT
TACGATGACC TGTCCAAGCA GGCCGTTGCC TACCGTCAGA TCTCCCTGCT GCTGCGCCGT
CCACCAGGAC GTGAAGCGTA CCCAGGCGAC GTGTTCTATC TCCACTCCCG TCTGCTGGAG
CGTGCATCGC GCGTTTCGGA AGAATACGTC GAGAAGTTCA CCAACGGCGC TGTGACTGGC
AAAACCGGTT CCCTGACCGC TCTGCCGATC ATCGAAACCC AGGCTGGCGA CGTTTCCGCG
TTCGTTCCGA CCAACGTGAT TTCCATCACC GACGGTCAGA TCTTCCTGGA ATCGGCCATG
TTCAACTCGG GCATCCGCCC TGCAGTGAAC GCCGGTGTTT CGGTATCCCG TGTAGGTGGT
GCCGCTCAGA CCAAGATCAT CAAGAAGCTG TCCGGTGGTA TTCGTACCGC ACTGGCTCAG
TACCGTGAAC TGGCTGCATT CGCCCAGTTC GCTTCCGATC TGGACGAAGC GACCCGCAAG
CAGCTGGAGC ATGGTCAGCG CGTAACCGAG CTGATGAAGC AGAAGCAGTA CGCGCCGATG
TCCATCGCGG ACATGGCTCT GTCGCTGTAC GCCGCTGAGC GTGGCTTCCT GACCGACGTA
GAAGTCTCCA AGATCGGCAG CTTCGAGCAA GCACTGATCG CCTTCTTCAA CCGTGATCAC
GCTGAACTGA TGGCGAAGAT CAACGTGAAG GGTGACTTCA ACGACGAAAT CGACGCAGGC
CTGAAAGCCG GTATCGAGAA GTTCAAGGCC ACCCAGACCT GGTAA
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| Protein sequence | MQQLNPSEIS EIIKGRIDNL DVSSQARNEG TVVSVSDGIV RIHGLADVMY GEMIEFPGGV
YGMALNLEQD SVGAVILGAY DTLAEGMSAK CTGRILEVPV GKELLGRVVD ALGNPIDGKG
PLGNTQTDAV EKVAPGVIWR KSVDQPVQTG YKSVDAMIPV GRGQRELIIG DRQIGKTAMA
IDAIINQKDS GIFCVYVAVG QKRSTVANIV RKLEENGALA NTIVVVASAS ESAALQFLAP
YAGCTMGEFF RDRGEDALIV YDDLSKQAVA YRQISLLLRR PPGREAYPGD VFYLHSRLLE
RASRVSEEYV EKFTNGAVTG KTGSLTALPI IETQAGDVSA FVPTNVISIT DGQIFLESAM
FNSGIRPAVN AGVSVSRVGG AAQTKIIKKL SGGIRTALAQ YRELAAFAQF ASDLDEATRK
QLEHGQRVTE LMKQKQYAPM SIADMALSLY AAERGFLTDV EVSKIGSFEQ ALIAFFNRDH
AELMAKINVK GDFNDEIDAG LKAGIEKFKA TQTW
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