| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5425 |
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| Symbol | |
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| ID | 5873240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 6057247 |
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| End bp | 6058080 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641550561 |
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| Product | integrase catalytic region |
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| Protein accession | YP_001671642 |
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| Protein GI | 167036411 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.257494 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGGCGCC TATGCCAAAC CCTAAAGGTG CATCCCAGCG GCTACTACGC CTGGCTGACC
GAGCCTCAAT CTGCCCGAGC AAAAGAAGAT CATCGTCTGC TTGGCTTGAT CAAACATGCT
TGGCTCGAAA GCGGAGGTGT GTACGGCTAC CGCAAAATTC ATGATGACCT GCGTGAGCTG
GGAGAGACAT GCGGGCGCAA TCGAGTCGGA CGCTTGATGC AGGCAGAGGG GTTGCGTTCG
CAAACGGGCT ATCGGCGGCG TCCAGGGTTT TACGGTGGAA AGCCAACAGT GGCCTCTCCC
AACCATCTCG CGCGGCAGTT CAAAGTCAGT GAGCCGAATA AGGTCTGGGT AACCGATATC
ACTTACATCC GCACCTATGA AGGATGGCTG TACCTAGCGG TAGTCCTGGA TCTGTTTTCC
CGCCAAGTGA TTGGCTGGTC AATGAAGCCC CGCATGTGCA GCGACCTGGC GCTTGACGCG
ATGTTGATGG CCGTGTGGCG CCGCAAACCA CGGCAGCAAG TGATGATCCA TTCAGACCAA
GGCAGTCAAT TCAGTAGCTC AGACTGGCAA AGCTTCTTGA AGGCCAACAA TATAATCAGC
AGCATGAGTC GGCGGGGAAA TTGCCACGAC AATGCCGTAG CCGAAAGCTT TTTCCAGCTT
TTGAAGCGGG AGCGAATCCG ACGAAAAATC TACGCAACAC GTGACGAAGC CCGAAGTGAT
ATTTTCGATT ACATTGAAAT GTTTTATAAC CCAAGGCGCA GACACAGCAG TGCTATGCAG
CTGTCGCCAG TAGAGTATGA GAAACGCTAT TTTCTGAGCT TGGAGAGTGT CTAG
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| Protein sequence | MRRLCQTLKV HPSGYYAWLT EPQSARAKED HRLLGLIKHA WLESGGVYGY RKIHDDLREL
GETCGRNRVG RLMQAEGLRS QTGYRRRPGF YGGKPTVASP NHLARQFKVS EPNKVWVTDI
TYIRTYEGWL YLAVVLDLFS RQVIGWSMKP RMCSDLALDA MLMAVWRRKP RQQVMIHSDQ
GSQFSSSDWQ SFLKANNIIS SMSRRGNCHD NAVAESFFQL LKRERIRRKI YATRDEARSD
IFDYIEMFYN PRRRHSSAMQ LSPVEYEKRY FLSLESV
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