| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5414 |
|---|
| Symbol | cls |
|---|
| ID | 5873229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 6042477 |
|---|
| End bp | 6043916 |
|---|
| Gene Length | 1440 bp |
|---|
| Protein Length | 479 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641550550 |
|---|
| Product | cardiolipin synthetase |
|---|
| Protein accession | YP_001671631 |
|---|
| Protein GI | 167036400 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.331005 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTACC ACAGCCCCTA CTTCTTTGGT TACCTACTCG GCCTGATACA TCTGCTGGGT
ATCGTAGCCG CACTGCACGC GGTGTTCACC GTGCGGACTG CCCAAGGCGC GATTGCCTGG
GCCATGCCCT TGTTCTTCAT CCCCTACCTC ACCTTGATTC CCTATCTGGT CTTCGGTGCC
CGATCGTTCT ATGCCTACAT CAAGGCGCGG CGCCAGGCCA ACCACGAAAT GCACGTGGCC
ATGGCCAACC TCAACTGGCG GCCCTGGGTT GAGGAAGCCC TTACTGCCCG TGAGTCGGAA
AGCTACGCAG CCTTGCGCGC CATGCCCAAG CTGAGTCGCA TGCCATGCCT GGCAAACAAC
CAGGTGAAAC TGCTGATCAA TGGCCAGGCC ACATTTGATG CCATTTTCGC TGCCATCGAG
AAAGCCCGCG ATGTGGTGCT GGTGCAGTTC TTCATCATTC ATGACGACAC CCTTGGCAAA
GCGCTGCAGC AACTGTTGTT ACGCAAGGCC GCCGAAGGGG TGCAGGTGTT CGTGCTCTAC
GACCGTGTCG GCAGCCACGC CTTGCCGGCC AGTTACAGCC AGGTGCTGCG TGACGGTGGT
GTGCAGATCC ATGCCTTCGC CACCCGCCGC GGCTGGTTCA ATCGTTTCCA GGTCAACTTC
CGCAACCATC GCAAGATCGT GGTGGTGGAT GGCCTGGTCG GTTTCATCGG CGGGCACAAC
GTGGGTGACG AGTACCTGGG TAAGCACCCG CAGCTTTCAC CCTGGCGCGA CACCCATGTG
CAGATTAGCG GGCCGGTGCT GGCCTGCCTG CAAGAGTCGT TCGCCGAAGA CTGGTACTGG
GCCACGCGCC AGCTACCGCC ACTGATCCTG CCAGATGCCT ACCCGGACAA CGGTGTCCTG
TGCCAGGCCT TGGCCAGCGG CCCGGCAGAC CCACAGGAAA CCTGCTCGCT GTTCTTCCTT
GAAGCAATTC ACTCCGCCAC CCGCAGAGTG TGGATCACCA GCCCTTACTT CATTCCTGAC
GAGGCCGTGT TCGCCGCCTT GCGCCTGGCG GTGTTGCGAG GGGTCGATGT GCGCGTGCTG
ATTCCATCAC GGCCGGACCA CCGCATTGTC TATGCCGCCT CCAGCCTGTT CGCCTTTGAA
GCGGTACGCG CAGGGGTGCG CGTGTTCCGT TACCAGCCAG GGTTCCTGCA TCAGAAGGTG
GTGTTGGTGG ATGACGACGT CAGTGCGATT GGCAGTGCCA ACCTGGACAA CCGCTCGTTC
CGCCTGAACT TCGAAATTAC CCTGCTGACA GTCGACCGCA GCTTCGCCGA CCAGGTCGAG
CACATGCTGA ACGATGACTT TGAACAGGCA CGGGAGATTA CTGCAGAGGA CAGCCGCGAT
ACGCATCGAC TGCAACAACT GGGGATGCGC ATTGCGCGGC TGATTTCACC GATTCTCTAA
|
|---|
| Protein sequence | MDYHSPYFFG YLLGLIHLLG IVAALHAVFT VRTAQGAIAW AMPLFFIPYL TLIPYLVFGA
RSFYAYIKAR RQANHEMHVA MANLNWRPWV EEALTARESE SYAALRAMPK LSRMPCLANN
QVKLLINGQA TFDAIFAAIE KARDVVLVQF FIIHDDTLGK ALQQLLLRKA AEGVQVFVLY
DRVGSHALPA SYSQVLRDGG VQIHAFATRR GWFNRFQVNF RNHRKIVVVD GLVGFIGGHN
VGDEYLGKHP QLSPWRDTHV QISGPVLACL QESFAEDWYW ATRQLPPLIL PDAYPDNGVL
CQALASGPAD PQETCSLFFL EAIHSATRRV WITSPYFIPD EAVFAALRLA VLRGVDVRVL
IPSRPDHRIV YAASSLFAFE AVRAGVRVFR YQPGFLHQKV VLVDDDVSAI GSANLDNRSF
RLNFEITLLT VDRSFADQVE HMLNDDFEQA REITAEDSRD THRLQQLGMR IARLISPIL
|
|---|
| |