Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5406 |
Symbol | |
ID | 5873221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 6036180 |
End bp | 6037052 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641550542 |
Product | pyridoxamine kinase |
Protein accession | YP_001671623 |
Protein GI | 167036392 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2240] Pyridoxal/pyridoxine/pyridoxamine kinase |
TIGRFAM ID | [TIGR00687] pyridoxal kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 59 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0868462 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGTA CCCCGCACCT GCTCGCCATT CAGTCTCATG TGGTGTTCGG CCACGCCGGC AACAGCGCCG CGGTGTTCCC CATGCAGCGT ATCGGGGTCA ATGTCTGGCC GCTCAATACC GTGCAGTTCT CCAATCACAC ACAGTATGGC CAGTGGGCGG GTGAAGTGCT TGCCCCGGCG CAAATTCCTG CGTTGGTGGA AGGTATTTCC AACATCGGCG AGCTGGGCCA CTGCGATGCG GTGCTTTCCG GCTACCTGGG CAGTGCCGAA CAGGGGCGAG CGATCCTGGC CGGCGTCGAG CGGATCAAGG CGGTGAACCC AAAGGCTTTG TACCTGTGCG ACCCGGTCAT GGGGCACCCG GAGAAGGGCT GCATCGTCCC GCCCGAAGTC AGTGCGTTTC TGCTCGAGGA GGCGGCGGCC AGGGCGGACA TCCTGTGCCC CAACCAACTG GAGCTGGACA GCTTTTGTGG GCGCCGCGCG CAGTCACTGG AAGATTGCGT GAACATGGCG CGCAGCTTGC TGAAGCGTGG GCCGCAGGTG GTGGTGGTCA AGCACCTGGC CTACCCTGGG CGCGCCGAGG ACCAGTTCGA AATGCTGCTG GTGACTGCCG AACACAGCTG GCACCTACGC CGCCCGCTGC TGGCGTTTCC ACGCCAGCCG GTGGGGGTGG GTGACCTCAC CTCCGGTTTG TTCCTGGCCC GTGTAATGCT GGGCGACAGC TGGGTGCAGG CATTCGAGTT CACGGCTGCA GCGGTGCATG AAGTGCTGCT GGAAACCCAG GCCTGCGCCA GCTACGAATT GCAGCTGGTG CGGGCTCAGG ACCGCATTGC GCACCCACGG GTACGCTTCG AGGCGCAGTT GCTGGCGCTT TAG
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Protein sequence | MKRTPHLLAI QSHVVFGHAG NSAAVFPMQR IGVNVWPLNT VQFSNHTQYG QWAGEVLAPA QIPALVEGIS NIGELGHCDA VLSGYLGSAE QGRAILAGVE RIKAVNPKAL YLCDPVMGHP EKGCIVPPEV SAFLLEEAAA RADILCPNQL ELDSFCGRRA QSLEDCVNMA RSLLKRGPQV VVVKHLAYPG RAEDQFEMLL VTAEHSWHLR RPLLAFPRQP VGVGDLTSGL FLARVMLGDS WVQAFEFTAA AVHEVLLETQ ACASYELQLV RAQDRIAHPR VRFEAQLLAL
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