| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5399 |
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| Symbol | |
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| ID | 5873214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 6027139 |
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| End bp | 6028005 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641550535 |
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| Product | RpiR family transcriptional regulator |
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| Protein accession | YP_001671616 |
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| Protein GI | 167036385 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0126961 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATCTGT TGCAACATAT CGCCCAATCG CGCCACCTGC TGCGCAAATC GGAACTCAAA
GTGGCCGACC ACGTGCTGCT CGACCCGGCT GCCGTCATGC ACAGCTCCAT GGCCGATCTG
GCGCACAGTG TGGGCATCAG CGAGCCGACC ATCGTACGTT TCTGCCGGGC GATCGGTTGC
TCGGGCTTCC AGGACCTGAA ACTCAAGCTG GCGCAGAGCC TGGCGGCTGG GGCCAGTTTT
GGCCAGTTTG CCATCCATGA AGACGACTCG GTCGCCGACT ACAGCCTGAA GATCTTCGAC
ACCACCCTGC ACACCCTGAT GGAAGTGCGC GAGCACCTCG ACCCGCATGC GCTTCAGCAG
GCGGTGAGCG CCATGGCCCA GGCACAGCGT GTCGAGTTCT ATGGCTTTGG TGCCTCTGGT
GCGGTGGCGG CCGATGCCCA GCACAAGTTC TTCCGCCTGC TGCTCAGTGC CGCTGCTTAT
TCCGACCCGC ACATGCAGGC GATGTCGGCG GTAACCTTGA AGCCGGGCGA TGTGGCCGTG
TGTATTTCCC AGTCGGGTCG CTCCAAGGAC TTGCTGATCA CCGCCAACCT GGTGCGTGAG
AGCGGCGCCA ACCTGATTAC CCTGTGCCCC AGCCAGACGC CGCTGGCCGA GCTGTCGACG
GTCAACCTGG CGATCGACGT GCATGAGGAC ACCGAAATCT ATACCCCGCT GACCTCGCGT
ATCGCCCACC TTGTGGTGAT TGACGTGCTG GCCATGGGCG TGGCCATGGC GCGGGGCCCG
AGCCTGGTCA ACCACCTGAA AAGCGTGAAG CGCAGCTTGC GCAGCCTGCG TTTGTCGCCC
AAGTCGATCA AGGCTACAGA TGACTGA
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| Protein sequence | MNLLQHIAQS RHLLRKSELK VADHVLLDPA AVMHSSMADL AHSVGISEPT IVRFCRAIGC
SGFQDLKLKL AQSLAAGASF GQFAIHEDDS VADYSLKIFD TTLHTLMEVR EHLDPHALQQ
AVSAMAQAQR VEFYGFGASG AVAADAQHKF FRLLLSAAAY SDPHMQAMSA VTLKPGDVAV
CISQSGRSKD LLITANLVRE SGANLITLCP SQTPLAELST VNLAIDVHED TEIYTPLTSR
IAHLVVIDVL AMGVAMARGP SLVNHLKSVK RSLRSLRLSP KSIKATDD
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