Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5396 |
Symbol | |
ID | 5873211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 6024260 |
End bp | 6025675 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641550532 |
Product | pyruvate carboxylase subunit A |
Protein accession | YP_001671613 |
Protein GI | 167036382 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0439] Biotin carboxylase |
TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.00770479 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGATAAAAA AAATCCTGAT CGCCAACCGA GGTGAAATCG CAGTTCGGAT CGTGCGTGCC TGCGCCGAGA TGGGCATACG CTCGGTAGCG ATCTTTTCCG ACGCCGACCG GCATGCCTTG CACGTCAAGC GCGCCGACGA AGCCCACAGC ATTGGTGCCG AGCCGCTGGC CGGCTACCTG AACCCGCGCA AGCTGGTGAA CCTGGCTGTG GAAACCGGTT GTGATGCCCT GCACCCGGGC TATGGTTTTT TGTCGGAAAA CGCTGAACTG GCAGAGATCT GCGCCGAGCG CGGGATCAAG TTCATCGGCC CGGCCGCCGA CGTGATTCGC CGCATGGGCG ACAAGACCGA AGCGCGCCGC ACCATGATCG CCGCTGGTGT GCCGGTCACC CCTGGCACCG AAGGCAACGT TGCCGATATT CATGAAGCCT TGAGCGAAGG CGAGCGCATC GGTTACCCGG TGATGCTCAA GGCCACCTCC GGTGGTGGCG GTCGCGGTAT TCGCCGTTGC AACAGCCGCG AAGAACTGGA ACAGAACTTC CCACGGGTGA TTTCCGAGGC GACCAAGGCC TTTGGTTCGG CTGAAGTGTT CCTGGAAAAG TGCATCGTCA ACCCCAAGCA CATCGAGGCG CAGATCCTCG GTGACAGCTT TGGCAACGTG GTGCACCTGT TCGAGCGCGA CTGCTCGATC CAGCGCCGTA ACCAGAAACT CATCGAAATC GCCCCAAGCC CCCAGCTCAC CCCCGAGCAG CGCGCCTACA TTGGCGACCT GGCAGTGCGT GCGGCCAAGG CGGTGAACTA CGAGAACGCC GGTACCGTGG AGTTTCTGCT CGCCGATGGC GAGGTGTACT TCATGGAAAT GAACACCCGG GTGCAGGTGG AACACACCAT CACCGAGGAA ATCACCGGTA TCGACATCGT CCGTGAGCAG ATTCGCATTG CCTCGGGCTT GCCGCTGTCG GTCAAGCAAG AAGACATTCA GCACCGCGGT TACGCGTTGC AGTTCCGTAT CAACGCCGAA GACCCGAAGA ACAACTTCCT GCCAAGTTTC GGCAAGATCA CCCGTTACTA CGCCCCCGGC GGCCCCGGCG TGCGTACCGA CACGGCGATC TACACCGGCT ACACCATTCC GCCGTTCTAC GACTCCATGT GCCTGAAACT GGTGGTGTGG GCGTTGACCT GGGAAGAAGC CATGGACCGC GGCCTGCGGG CCCTGGACGA CATGCGCGTG CAAGGGGTGA AGACCACCGC CGCGTACTAC CAGGAAATCC TGCGCAATCC GGAATTCCGT AGCGGCCAGT TCAATACCAG CTTCGTCGAA AGCCACCCTG AACTGACCAA CTACTCGATC AAGCGCAAAC CCGAAGAGCT GGCCCTGGCC ATCGCCGCCG CCATCGCCGC CCACGCAGGC CTGTGA
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Protein sequence | MIKKILIANR GEIAVRIVRA CAEMGIRSVA IFSDADRHAL HVKRADEAHS IGAEPLAGYL NPRKLVNLAV ETGCDALHPG YGFLSENAEL AEICAERGIK FIGPAADVIR RMGDKTEARR TMIAAGVPVT PGTEGNVADI HEALSEGERI GYPVMLKATS GGGGRGIRRC NSREELEQNF PRVISEATKA FGSAEVFLEK CIVNPKHIEA QILGDSFGNV VHLFERDCSI QRRNQKLIEI APSPQLTPEQ RAYIGDLAVR AAKAVNYENA GTVEFLLADG EVYFMEMNTR VQVEHTITEE ITGIDIVREQ IRIASGLPLS VKQEDIQHRG YALQFRINAE DPKNNFLPSF GKITRYYAPG GPGVRTDTAI YTGYTIPPFY DSMCLKLVVW ALTWEEAMDR GLRALDDMRV QGVKTTAAYY QEILRNPEFR SGQFNTSFVE SHPELTNYSI KRKPEELALA IAAAIAAHAG L
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