| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5394 |
|---|
| Symbol | |
|---|
| ID | 5873209 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 6021666 |
|---|
| End bp | 6022337 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641550530 |
|---|
| Product | GCN5-related N-acetyltransferase |
|---|
| Protein accession | YP_001671611 |
|---|
| Protein GI | 167036380 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.757862 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.00983095 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACTGACG CATTGAACTG GAAACCCGCC GCAACACCCA AGGCCGAGCC AATCGAAGGC
CGCTTCATCC GCCTGGAAAA GCTCGACCCG GTGCGCCATG GCAACGACCT CTGGGAGGTA
CTGCAGGGGC CAGCCTCCGA CCCAGTGCTG TGGGACTACC TGCCCTACGG CCCATTCGCC
GAACGTGCCG CCTTCGATCG CTGGCTGGAA GGCAACGCTG CAGGCCAGGA CCCGCTGTAC
TACACCGTCA TCGACCGCGC TAGTGGCCAG GCCCAGGGCA TCCTCACCCT GATGTCGATC
GTGCCCGACC ACGGCCGAAT CGAAATCGGC CATATCGCTT TCGGCGCCCC CATGCAGCGC
ACGCCCAAGA GCACCGAGGC GGTGTACCTG CTGGGCAAGC TCGGCTTCGA ACTGGGCAAC
CGCCGGCTGG AGTGGAAGTG CAATAACGCC AACGCCCGCT CGAAGCGTGC AGCGGAGCGA
TTTGGCTTCA CCTACGAAGG GGTTTTCCGC AAACACCTGG TGGTGAAGGA CCACAACCGC
GATACGGCCT GGTATTCGAT TACCGATGAT GAATGGCCGG CGGTGGCTGC CGGCTTCGAG
CGGTGGCTGG GTGAGGATAA TCAGCAGCCA GGCGGGCAGC GACAAACATT GGAAGCGTGC
CGCAACGGTT GA
|
|---|
| Protein sequence | MTDALNWKPA ATPKAEPIEG RFIRLEKLDP VRHGNDLWEV LQGPASDPVL WDYLPYGPFA
ERAAFDRWLE GNAAGQDPLY YTVIDRASGQ AQGILTLMSI VPDHGRIEIG HIAFGAPMQR
TPKSTEAVYL LGKLGFELGN RRLEWKCNNA NARSKRAAER FGFTYEGVFR KHLVVKDHNR
DTAWYSITDD EWPAVAAGFE RWLGEDNQQP GGQRQTLEAC RNG
|
|---|
| |