| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5391 |
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| Symbol | |
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| ID | 5873206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 6018950 |
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| End bp | 6020479 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641550527 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001671608 |
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| Protein GI | 167036377 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.253395 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0145041 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGC AGCCCCTCAT ACTGCCTTTC GACCCTGCCG GCATCGCCCT TGATCGCCGT
CGCGGGCTTA GCCAGCAGCT TTATCAGGCG TTACGGGCGC GGGTGCTGGA TGGGCGCCTG
AGCAGTGGCA CGCGGCTGCC GGCCACACGT GACCTGGCGG GCATGCTGGC GCTGTCACGC
AACAGCGTGG TGCGTGCCTA TGACCAACTG TATGCCGAAG GCTACATCGA AAGCCGCGTC
GGTGATGGCA CGTACGTTAG CCAGCTTCCG AAACTATCCA CACAAGTATC CACAGGGTTA
TCCCTGGGTT TATCAACAGG GTTATCCACA TTTTCCGTTG GAAATACTGA TGATTTATCC
AGCGATCGAC GTTTGAGCGA GCCTTTGCAG CGCTTGAAAA GTGGTCATTT GCCCTCGCCA
AGAAGCGGTG CGCCTCGTGC TTTTCGCGTC GGTATTCCGG CATTCGACCT GTTCCCATTT
GACGTCTGGG CCAAGCTGCA GGCGGGTTTC TGGCGCAACC CTTCCCCTGA ACAGCTGGGC
TACGGTGATC CGGCAGGTGA GCCGGCTTTA CGCGAGTTGA TCGCGGCTTA CCTGCGCCGC
TCGCGCGGGC TGAGCTGCAC GGCTGAACAA ATTGTGATCA CCAGTGGTGC GCAGCAGGCC
ATCAGCCTTT GTGCACAGCT GCTGCTGCAA CCTGGCGACG GTGTGGCTGT GGAAAACCCA
GGCTATCGGG CGGCCGGTCA TGCTTTCACG CTGGCGGGTG GCCGAGTGTT TGGCGTGCCG
GTGGATGAAG ACGGCATGGA TTGCGGCCGG CTCGAGCAAC GGCCGGATTG CCGGCTGGCC
TATGTCACGC CTGCTCACCA GTACCCGACC GGGGTGACCA TGAGCCTGGC GCGCCGCCTG
GCATTGCTGG CCTGGGCGGA ACGCAGCGAT GGCTGGGTCA TCGAGGACGA CTACGACGGC
GAGTATCGCT ACAGTGGCGC GCCGCTGGCC CCGCTGGCAG CGCTCGACCG GCACGGGCGG
GTGCTGTATG TCGGCACCTT TGGCAAGATC GCCTTCCCGG CGTTACGCCT GGGCTATCTG
GTGCTCCCGC CGCAGCTGGC GCAGGCGTTC AGCCAGGGCA AGGCGCTAGC GGTGCGGCAT
TCGGAGGTCA GCAGCCAGTG CGTGATGGCC GAGTTCATGG CCCGCGGGCA TTTTCAGCGG
CATATCCGCC GTATGCGCAA GGCGGCGTTG AACCGGCGCA ATGTGCTCAA GGCCGGTTGG
CCAGTGGATG TTCCGGGGTT GGGCGCAATG CCGGAAGTGG CGGCCGGGCT GCATGTGAAG
GTCGATGTGG ATAACTTTGC GAAAGAGCAG GAACTGGTGG CAAGAGCGGA GGCGGTGGGC
GTGGAGGTAA CACCGCTGAG CAATTTCTGG TTGGCGGATA GCGATGTGCC TGTGGATAAG
CGAGCGGGCT TGGTGCTGGG GTTTGCGGCG GTGCCGGAGG GTGAGATTGC CGAGGCCCTG
ATGAAGCTGC GCAAAGCCTG GAGAAAGTGA
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| Protein sequence | MSQQPLILPF DPAGIALDRR RGLSQQLYQA LRARVLDGRL SSGTRLPATR DLAGMLALSR
NSVVRAYDQL YAEGYIESRV GDGTYVSQLP KLSTQVSTGL SLGLSTGLST FSVGNTDDLS
SDRRLSEPLQ RLKSGHLPSP RSGAPRAFRV GIPAFDLFPF DVWAKLQAGF WRNPSPEQLG
YGDPAGEPAL RELIAAYLRR SRGLSCTAEQ IVITSGAQQA ISLCAQLLLQ PGDGVAVENP
GYRAAGHAFT LAGGRVFGVP VDEDGMDCGR LEQRPDCRLA YVTPAHQYPT GVTMSLARRL
ALLAWAERSD GWVIEDDYDG EYRYSGAPLA PLAALDRHGR VLYVGTFGKI AFPALRLGYL
VLPPQLAQAF SQGKALAVRH SEVSSQCVMA EFMARGHFQR HIRRMRKAAL NRRNVLKAGW
PVDVPGLGAM PEVAAGLHVK VDVDNFAKEQ ELVARAEAVG VEVTPLSNFW LADSDVPVDK
RAGLVLGFAA VPEGEIAEAL MKLRKAWRK
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