| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5390 |
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| Symbol | |
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| ID | 5873205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 6017814 |
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| End bp | 6018917 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641550526 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001671607 |
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| Protein GI | 167036376 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.110702 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0735387 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCCGAC TCAAGCGTCT GCTCACCCCG TTCATCGCTG CCACCCTGTT CACCGGTGCC
CTGCACGCCC AAGCGGAGCA GCGCACCCTG CGTGTGTATA ACTGGTTCGA TTACATCACC
CCGCAGACCT TGACCGACTT CCAGAAGGAC AGCGGCGTCA AACTGGTGTA CGACATCTTC
GACACCAACG AAGCACTGGA GGCCAAGCTG CTCACCGGCA ACTCCGGCTA TGACGTGGTG
GTACCGTCCA ACGTGTTCCT CGCCAAACAG ATCGAAGCCG GGGTTTTCCA GCCGCTGGAC
CGCAGCAAGC TGCCGAACTG GCAACACCTG GACCCGGCGC TGATGAAGCT GATCGAAGCC
AACGACCCAG GCAACAAGTT TGCCGTGCCG TATATGTATG GCACCGTGTT GATCGGCTTC
AACCCGGCCA AGGTCAAGGC GGCGCTGGGC GACAATGCGC CGGTGGACAG CTGGGACCTG
ATCTTCAAGG AAGAGAACAT CGCCAAGCTC AAGCAGTGCG GCGTAGCCCT GCTCGACTCG
CCATCGGAGA TCATGCCTCT GGCCCTGCAG TACCTGGGCT TGCCGCCGAA CAGCGACAAA
CCGGCCGACT ACAAGAAGGC CGAGGAACTG ATGCTGAAGA TTCGCCCGCA TATCACCTAC
TTCCATTCCT CGAAGTACAT GGCAGATATT GCCAATGGCG ACATCTGCGT GGCGGTAGGC
TACAGCGGCA GCTTCTCGCA GGCCGCCAAC CGCGCCCGTG AGGCGAAAAA TGGCGTGGTG
GTGGACATGC GCCTGCCCAA GGAAGGCGCG CCGATCTGGT TCGACATGCT GTCGATTCCG
AAGGGCGCGG CCAACCCGGA GGATGCGCAT GCGTTCATCA ACTACCTGCT GCGACCCGAG
GTGATCGCAC CCATCAGCGA CTTCGTTGGG TATCCGAACC CGAACAAAGA TGCGACCGCC
AAGGTGAACC CGACGATTCG CAACAACCCC AACCTGTACC CGACGGCCGA GGCGATGGCC
AAGCTGTATA CCCTCAAGCC CCTGGCACGG GATGCCGAAC GGGCGCGAAC CCGGGCCTGG
ACGCGGATCA AGTCCGGCAC CTGA
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| Protein sequence | MVRLKRLLTP FIAATLFTGA LHAQAEQRTL RVYNWFDYIT PQTLTDFQKD SGVKLVYDIF
DTNEALEAKL LTGNSGYDVV VPSNVFLAKQ IEAGVFQPLD RSKLPNWQHL DPALMKLIEA
NDPGNKFAVP YMYGTVLIGF NPAKVKAALG DNAPVDSWDL IFKEENIAKL KQCGVALLDS
PSEIMPLALQ YLGLPPNSDK PADYKKAEEL MLKIRPHITY FHSSKYMADI ANGDICVAVG
YSGSFSQAAN RAREAKNGVV VDMRLPKEGA PIWFDMLSIP KGAANPEDAH AFINYLLRPE
VIAPISDFVG YPNPNKDATA KVNPTIRNNP NLYPTAEAMA KLYTLKPLAR DAERARTRAW
TRIKSGT
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