| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5386 |
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| Symbol | |
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| ID | 5873201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 6012943 |
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| End bp | 6013875 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641550522 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001671603 |
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| Protein GI | 167036372 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.110061 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCTTG AAAGCAAATG GCTGGAAGAC TTCAGTGCGC TGGCCGCTAC CCGCAGTTTT
TCCCAGGCGG CAGAGCGGCG TTTCGTGACC CAACCGGCCT TCAGCCGGCG CATTCGCAGC
CTTGAAGCGG CGCTGGGCCT GCAACTGGTG AACCGTTCCC GCACACCGAT CGAACTGACC
GAAGCCGGGC AGCTTTTTCT CGTCACAGCG CGCACCGTTG TCGACCAGTT GGGCGAAATT
CTCCGCCATT TACATCACCT TGAGGGTGGG CAGGGCGAGG TGGTTCAGGT AGCGGCGGCA
CACTCCTTGG CATCAGGCTT TTTCCCCCGT TGGGTTGCCC AGTTGCGCAA CGACGGTTTG
AACATCGCCA CCCGCCTGGT TGCGACTAAC GTCGGAGATG CCGTGCACGC ATTGCGCGAG
GGCGGCTGTG ACCTGATGCT GGCTTTCTAC GACCCGGATG CGGCCCTGCA GATGGATGCC
GAGATCTTCC CGTCGCTGCA CATGGGCACT ACGGAAATGC TGCCGGTGTG TGCAGTGGAT
GCCGAAGGCA AGCCATTGTT CGACCTGGAA GGCGAGGGCA GCGTGCCGCT GCTGGCCTAT
ACCGCGGGTG CATTCCTCGG GCGGTCGGTG AATTTGCTGC TGCGCCAGCG CAACCTGCGC
TATACCACCG TCTATGAAAC CGCCATGGCC GACAGCCTTA AAAGCATGGC GTTGGAAGGC
CTGGGCATCG CCTGGGTGCC GCGCCTGTCG ATGCGAGGCG AGCTGGAACG GGGCGAACTG
GCTGTCTGCG GCGGCAGCCA GTGGCATGTG CCACTGGAAA TTCGCCTGTA CCGCTGCGCC
CTGGTGCGCA AGGCCAACGT CAGGCTGTTG TGGCGTAAGC TCGAGGGGGC GGCGGCGGTT
GACCCAAAAG TCAGCCAAAG CCCCGAAAAA TAA
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| Protein sequence | MNLESKWLED FSALAATRSF SQAAERRFVT QPAFSRRIRS LEAALGLQLV NRSRTPIELT
EAGQLFLVTA RTVVDQLGEI LRHLHHLEGG QGEVVQVAAA HSLASGFFPR WVAQLRNDGL
NIATRLVATN VGDAVHALRE GGCDLMLAFY DPDAALQMDA EIFPSLHMGT TEMLPVCAVD
AEGKPLFDLE GEGSVPLLAY TAGAFLGRSV NLLLRQRNLR YTTVYETAMA DSLKSMALEG
LGIAWVPRLS MRGELERGEL AVCGGSQWHV PLEIRLYRCA LVRKANVRLL WRKLEGAAAV
DPKVSQSPEK
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