Gene PputGB1_5385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5385 
Symbol 
ID5873200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp6012280 
End bp6012771 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content65% 
IMG OID641550521 
Productphosphoribosylaminoimidazole carboxylase, catalytic subunit 
Protein accessionYP_001671602 
Protein GI167036371 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 
TIGRFAM ID[TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0672045 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCAC TGGTTGGCGT GATCATGGGC TCCAAGTCCG ATTGGTCCAC CCTTAGCCAC 
ACCGCCGATA TGCTGGAAAA ACTCGGCATT CCCTACGAAG TGAAGGTGGT TTCCGCTCAC
CGCACCCCGG ATCTGCTGTT CCAGTATGCC GAGGAGGCCG AGGGCCGTGG CATCGAGGTG
ATCATCGCCG GTGCCGGTGG CGCAGCCCAC CTGCCAGGCA TGTGCGCCGC CAAGACCCAT
CTGCCGGTGC TGGGCGTGCC GGTGCAGTCG TCGATGCTGT CGGGCGTCGA TTCGCTGCTG
TCGATCGTGC AGATGCCTGC TGGCGTGCCG GTTGCCACCC TGGCCATCGG CCGTGCCGGT
GCGGTCAACG CTGCATTGCT GTCGGCCAGC ATCCTTGGCG CCAAGTACCC GCAGTACCAC
GCGGCGTTGA AGCAGTTCCG CACGGAACAG ACCGACACCG TGCTGGACAA CCCAGACCCG
CGCCAGGCTT GA
 
Protein sequence
MSALVGVIMG SKSDWSTLSH TADMLEKLGI PYEVKVVSAH RTPDLLFQYA EEAEGRGIEV 
IIAGAGGAAH LPGMCAAKTH LPVLGVPVQS SMLSGVDSLL SIVQMPAGVP VATLAIGRAG
AVNAALLSAS ILGAKYPQYH AALKQFRTEQ TDTVLDNPDP RQA