| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5383 |
|---|
| Symbol | |
|---|
| ID | 5873198 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 6010833 |
|---|
| End bp | 6011078 |
|---|
| Gene Length | 246 bp |
|---|
| Protein Length | 81 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641550519 |
|---|
| Product | transglycosylase-associated protein |
|---|
| Protein accession | YP_001671600 |
|---|
| Protein GI | 167036369 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2261] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.172957 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCATCA TTGGAACCAT CTTCATCGGC CTCATCGTCG GCCTGCTGGC CCGCTTCATC
AAGCCGGGCG ACGACAGCAT GGGCTGGATC ATGACCATCC TGCTGGGTAT TGCCGGCTCC
CTGTTGGCCA CCTATGGCGG CCAGGCGCTG GGCATTTACC AGGCTGGGCA GGCAGCAGGC
TTCCTTGGCG CCTTGATTGG TGCGGTCATC CTTCTGGTGA TCTACGGATT CATCAAGAAA
CGCTGA
|
|---|
| Protein sequence | MGIIGTIFIG LIVGLLARFI KPGDDSMGWI MTILLGIAGS LLATYGGQAL GIYQAGQAAG
FLGALIGAVI LLVIYGFIKK R
|
|---|
| |