Gene PputGB1_5374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5374 
Symbol 
ID5873189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5997199 
End bp5998869 
Gene Length1671 bp 
Protein Length556 aa 
Translation table11 
GC content65% 
IMG OID641550510 
Productphosphate ABC transporter, inner membrane subunit PstA 
Protein accessionYP_001671591 
Protein GI167036360 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4985] ABC-type phosphate transport system, auxiliary component 
TIGRFAM ID[TIGR00974] phosphate ABC transporter, permease protein PstA 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.642346 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAAAGG ATTCCCTCAA AGGCTGGTTC AAGAGCGGCG CCCCAGGCGT CTGGATGAGC 
GGCGGCGCGG TGGCCATGGC GGTGATCATG ACCGTCGGCC TGCTGGCGGT GATCGCCGTG
CGCGGCCTGG GCCACTTCTG GCCGGCCGAT CTTGTCCAGG CCACCTACAA GGTGCCGGGC
CAGGCTGATC ACATCGTTAT CGGCGAAGTG GTGCAAAAGG AAGAGGTGCC GCGTGCCCGC
CTCAAGGGCG CCGGCCTGCC GGTACCGGAC CAAGGCCCGG AGTTCATGAC CCGCGAGCTG
ATCAAGGTGG GTAACCGCGA CCTCAACGGC AGCGACTTCA CCTGGGTGGT TGGCGATTGG
TTGGTCGACG AACAGCGCCC GGCCGACCTG ATCGCCCTGG AGCGCCGCGA GTGGGGTAAC
TTCTACGGCT ACCTGGTCAG CGTCAAGGAA CAAGGCCGCG TGGTTGCCGA AGGCCCTGCA
GCCTGGACCG AGCTGCAAGC CCGTCTCAAG CGTGCCAACC ACCTTAATGG CGAGCTGCAG
CAACTGGAAA AGAAGGACAT CGGTGCCATC AACCATGGCC TCGAGCGCCT ACGCCTGCAG
GCCCGCAAGC TGGAACTGGA CGGCAAGCTG GACGCTGCCG CCCAGGCCGA CATGGACGCC
GACCGCGCCG AGCTGAACAG CCGCTACAAG GCCATCGAAG ACCGCCTGAC TGGCCTGCAC
CAAGCCTTCG CCCGCGACAG CCTGGTGGCG AGCGATGGCA ATGGCCGTGA AGTGGAAATC
AACCTGAGCA AGGTGGTGCA CGCCATCCAG CCGAACGGCA TGTCCGGTTT CACCAAGCTG
GGCACCTACT TTGCCAAGGT CTGGGAGTTC CTCAGCGACG ACCCGCGTGA AGCCAACACC
GAGGGCGGTA TCTTCCCGGC CATCTTCGGT ACGGTGATGA TGACCCTGAT CATGGCCGTG
ATCGTCACCC CGTTCGGCGT GCTGGCCGCT GTCTACCTGC GTGAATACGC AAGGCAAGGC
CCGGTGACCC GTTTGATCCG CATTGCGGTG AACAACCTGG CCGGTGTGCC GGCGATCGTC
TACGGCGTGT TCGGCCTGGG CTTCTTCGTC TACGTGCTGG GTGGCTCGAT CGACCGCCTG
TTCTTCCCCG AAGCACTGCC GGCGCCGACC CTGGGCACCC CTGGCCTGCT GTGGGCATCG
CTGACCCTGG CACTGCTGGC GGTGCCGGTG GTGATCGTGG CGACCGAAGA AGGCCTGGCG
CGTATCCCAC GCACCGTGCG TGAAGGTTCG CTGGCGCTGG GTGCGACCAA GGCGGAAACG
CTGTGGAAGA TCGTCCTGCC AATGGCCAGC CCGGCCATGA TGACCGGCAT GATCCTCGCC
GTGGCCCGCG CTGCCGGTGA AGTGGCGCCG CTGATGCTGG TGGGTGTGGT GAAGCTGGCG
CCGTCGCTGC CGGTGGACGG GAACTACCCG TACCTGCACC TGGACCAGAA GATCATGCAC
CTGGGCTTCC ATATCTATGA CGTCGGCTTC CAAAGCCCGA ACGTCGAAGC CGCGCGGCCG
CTGGTATATG CCACGGCGCT GCTGCTGGTG CTGGTGATCG CCACCCTCAA CCTGTCGGCC
GTGTGGATCC GCAACCACCT GCGCGAGAAG TACAAGGCGC TGGACAGCTG A
 
Protein sequence
MKKDSLKGWF KSGAPGVWMS GGAVAMAVIM TVGLLAVIAV RGLGHFWPAD LVQATYKVPG 
QADHIVIGEV VQKEEVPRAR LKGAGLPVPD QGPEFMTREL IKVGNRDLNG SDFTWVVGDW
LVDEQRPADL IALERREWGN FYGYLVSVKE QGRVVAEGPA AWTELQARLK RANHLNGELQ
QLEKKDIGAI NHGLERLRLQ ARKLELDGKL DAAAQADMDA DRAELNSRYK AIEDRLTGLH
QAFARDSLVA SDGNGREVEI NLSKVVHAIQ PNGMSGFTKL GTYFAKVWEF LSDDPREANT
EGGIFPAIFG TVMMTLIMAV IVTPFGVLAA VYLREYARQG PVTRLIRIAV NNLAGVPAIV
YGVFGLGFFV YVLGGSIDRL FFPEALPAPT LGTPGLLWAS LTLALLAVPV VIVATEEGLA
RIPRTVREGS LALGATKAET LWKIVLPMAS PAMMTGMILA VARAAGEVAP LMLVGVVKLA
PSLPVDGNYP YLHLDQKIMH LGFHIYDVGF QSPNVEAARP LVYATALLLV LVIATLNLSA
VWIRNHLREK YKALDS