| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5357 |
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| Symbol | |
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| ID | 5873172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5980692 |
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| End bp | 5981618 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641550493 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001671574 |
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| Protein GI | 167036343 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.164156 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTCA CAGAATTACG CTACATCGTC ACACTCGCCC AGGAACAGCA CTTCGGCCAC
GCCGCCGAGC GCTGCCACGT GAGCCAGCCG ACCCTGTCGG TCGGTGTGAA GAAGCTCGAG
GATGAGCTTG GCGTTCTGAT CTTCGAGCGC AGCAAAAGCG CGGTACGCCT GACCCCGGTC
GGTGAAAGCA TCGTTGCCCA GGCGCAGAAG GTACTGGAGC AGGCCCAAGG CATTCGCGAA
CTGGCGCAGG CCGGCAAGAA CCAGCTGACC GCCCCGCTCA AGGTCGGTGC CATCTACACC
GTCGGCCCCT ACCTGTTCCC GCATCTGATC CCGCAACTGC ACCGCGTGGC GCCGCAGATG
CCGCTGTACA TCGAAGAAAA CTTCACCCAC GTACTGCGCG AAAAGCTGCG CAACGGCGAA
CTGGACGCGG TGATCATCGC CCTGCCGTTC AACGAAGCCG ACGTGCTGAC CTTGCCGCTG
TACGACGAAC CGTTCTGCGC CTTGATGCCT GCCGACCACC CGTGGACGGC GAAGAAGACC
ATCGACACCG CCATGCTCAA CGACAAGAGC CTGTTGCTGC TCGGTGAAGG CCACTGCTTC
CGTGACCAGG TACTGGAAGC CTGCCCAACC TTGAACAAGG GGGGAGAAGG CTCCAGGCAC
ACCACGGTCG AGTCCAGTTC GCTGGAAACC ATCCGCCACA TGGTGGCCTC GGGCCTTGGC
GTGTCGATCC TGCCGCTGTC GGCCGTGCAC AGCCATCACT ACGCCCCCGG CGTCATCGAA
GTGCGCCCGC TGACGGCACC GGCACCTTTC CGTACCGTGG CCATCGCCTG GCGCGCCAGC
TTCCCTCGGC CCAAGGCCAT CGAGATCCTC GCTGACTCGA TCCGCCTGTG CTCGGTCGCA
AAAAACCCTG CGGAACAGCC GGCCTGA
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| Protein sequence | MTLTELRYIV TLAQEQHFGH AAERCHVSQP TLSVGVKKLE DELGVLIFER SKSAVRLTPV
GESIVAQAQK VLEQAQGIRE LAQAGKNQLT APLKVGAIYT VGPYLFPHLI PQLHRVAPQM
PLYIEENFTH VLREKLRNGE LDAVIIALPF NEADVLTLPL YDEPFCALMP ADHPWTAKKT
IDTAMLNDKS LLLLGEGHCF RDQVLEACPT LNKGGEGSRH TTVESSSLET IRHMVASGLG
VSILPLSAVH SHHYAPGVIE VRPLTAPAPF RTVAIAWRAS FPRPKAIEIL ADSIRLCSVA
KNPAEQPA
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