| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5356 |
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| Symbol | |
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| ID | 5873171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5979866 |
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| End bp | 5980597 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641550492 |
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| Product | TonB family protein |
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| Protein accession | YP_001671573 |
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| Protein GI | 167036342 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.772268 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.884832 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAAAA CGCGCTCGAA CATGGCGCGC TACGGTGGCA GCCTGGCGAT CGTGCTGGGC
GTGCACGTGG TCGCCGTGCT GCTGACGCTC AACTGGTCGG TGCCCCAGGC CATCGAACTG
CCCCCGGCAG CGATGATGGT CGAACTGGCA CCGCTACCGG AGCCTGCGCC ACCACCACCA
CCGAAAGCGG CTCCACAGCC ACCGGCACCG GTCGAAGAAC TGCCATTGCC GAAGCTGGTG
GAAGCGCCCA AGCCCAAGAT CGCCGTCCAC AAGCCGCCCA AGCCGAAGGC CAAGCCACAG
CCGCCCAAGC CCGAGAAAAA GCCTGAGCCG CCGAAGGAAG CGCCGCCAAC CGAGCAAACG
GTAGACGCAC CGCCCAGCAA CACGCCACCG CAGAAGTCCG CGGCACCGGC ACCGAGCATT
GCGTCCAACA GCAACGCCCT GCCCACCTGG CAGAGCGACC TGCTGCGCCA CCTGGCCAAA
TACAAGCGTT ACCCGGAAGA CGCGCGCCGT CGCGGCCTGC AAGGCATCAA CCGCCTGCGC
TTCGTGGTCG ACGCCGAAGG CAAGGTGGTG TCGTACTCCA TGGCCGGTGG TTCGGGCAGC
GCCGCACTGG ACCGGGCGAC CCTGGAAATG ATCCGTCGGG CCGGCACGGT ACCCAAGCCG
CCACCCGAGT TGCTGAACAA TGGCACGATC GAAGTCGTGG CACCGTTCGT CTACTCACTG
GACCGCCGCT GA
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| Protein sequence | MTKTRSNMAR YGGSLAIVLG VHVVAVLLTL NWSVPQAIEL PPAAMMVELA PLPEPAPPPP
PKAAPQPPAP VEELPLPKLV EAPKPKIAVH KPPKPKAKPQ PPKPEKKPEP PKEAPPTEQT
VDAPPSNTPP QKSAAPAPSI ASNSNALPTW QSDLLRHLAK YKRYPEDARR RGLQGINRLR
FVVDAEGKVV SYSMAGGSGS AALDRATLEM IRRAGTVPKP PPELLNNGTI EVVAPFVYSL
DRR
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