| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5350 |
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| Symbol | |
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| ID | 5873165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5973952 |
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| End bp | 5976060 |
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| Gene Length | 2109 bp |
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| Protein Length | 702 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641550486 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_001671567 |
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| Protein GI | 167036336 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.274227 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGGTA TAGAAGCCTT GGCCGAACGG CTGTCGACCT ATCTTGGCCC CGAACAGGTC
AACCTGGTCC GGCGCGCCTA TTTCTATGCC GAACAGGCCC ACGATGGGCA GCGCCGCCGC
AGTGGCGAGC CCTACGTGAC GCATCCGCTG GCCGTGGCCA GCATCCTCGC CGACATGCAC
ATGGACCATC AGAGCCTGAT GGCGGCCATG CTGCACGATG TGATCGAAGA CACCGGCATC
GCCAAGGAAG CCCTCAGCCA GCAGTTTGGC GAGACCGTGG CCGAGCTGGT CGATGGGGTC
AGCAAGCTGA CCCAGATGAA CTTCGAGACC AAGGCCGAGG CGCAGGCCGA GAACTTCCAG
AAGATGGCCA TGGCCATGGC TCGCGATATC CGCGTGATCC TGGTCAAGCT GGCCGACCGC
CTGCATAACA TGCGCACCCT GGAAGTGCTG TCCGGCGAAA AGCGCCGGCG CATCGCCAAG
GAAACCCTCG AAATCTACGC CCCCATCGCC AATCGCCTGG GGATGCACAC CGTGCGCGTG
GAGTTCGAAG ACCTCGGTTT CAAGGCCATG CACCCGATGC GCTCGTCGCT GATTCACCGA
GCGGTGAAAA GCGCACGCGG CAACCGTAAA GAGATCGTCG CCAAGATCGA GCACTCGCTG
GCCAACTGCC TGGCCGCCGA TGGTATCGAG GGCGAGGTCA GCGGCCGGCA GAAACACCTC
TATGGCATCT ACAAGAAGAT GCGCGGCAAG CGCCGTGCCT TCAACGAGAT CATGGACGTG
TATGCCTTCC GCATCATCGT CGACAAGGTC GATACCTGCT ACCGCGTGCT TGGCGCCGTG
CACAACCTGT ACAAGCCGCT GCCCGGTCGC TTCAAGGATT ACATCGCGAT CCCCAAGGCC
AACGGCTACC AGTCGTTGCA CACCACGCTG TTCGGCATGC ACGGCGTGCC CATCGAAATC
CAGATCCGCA CCCGCGAGAT GGAAGAGATG GCCAACAACG GCATCGCCGC GCACTGGCTA
TACAAGTCCA ACGACGACGA ACAGCCCAAG GGCAGCCACG CCCGCGCGCG TCAGTGGGTC
AAAGGCATCC TCGAGCTGCA GCAACGTGCC GGCAACTCGC TGGAATTCAT CGAGAGCGTG
AAGATCGACC TGTTCCCGGA CGAGGTCTAC GTGTTCACGC CCAAGGGCCG CATCATGGAG
CTGCCCAAAG GCTCCACGGC CGTCGACTTC GCCTACGCGG TGCACACCGA CGTCGGCAAC
AGCTGCATCG CCTGCCGCAT CAACCGTCGC CTGGCGCCGC TGTCCGAACC GCTGCAAAGC
GGCTCGACAG TGGAAATCGT CAGTGCCCCG GGCGCCCGAC CGAACCCGGC CTGGCTCAAC
TTCGTGGTCA CCGGCAAGGC GCGCACGCAC ATCCGCCACG CGCTCAAGCA GCAGCGCCGC
TCCGAGTCCA TCAGCCTGGG CGAGCGCCTG CTGAACAAGG TCCTCACCGG CTTCGACAGC
AGCCTGGAAA AAATCCCCCC GGAGCGCATT CAAGCGATTC TGGCCGAGTA CCGCCTGGAG
CTGATCGAAG ACCTGCTCGA GGACATCGGC CTGGGCAACC GCATGGCCTA CGTGGTCGCC
CGTCGCCTGC TGTCGGCCGA AGGCGAACAG CTGCCGGCGC CGGAAGGCCC GCTGGCGATC
CGCGGTACCG AAGGCCTGGT GCTGAGCTAC GCCAAGTGCT GTACACCGAT CCCAGGTGAC
CCGATCGTCG GCCACCTGTC GGCAGGCAAG GGCATGGTCG TGCACCTGGA AAACTGCCGC
AACATCAGTG AAATCCGCCA TAACCCGGAA AAGTGCGTAC AGCTCTCCTG GGCCAAGGAC
ATCACCGGCG AGTTCAATGT CGAACTGCGT GTCGAACTGG AACACCAGCG CGGCCTGATC
GCCCTGCTGG CCAGCAGCGT CAACGCCGCC GACGGCAACA TCGAGAAAAT CAGCATGGAC
GAACGCGACG GCCGTATCAG CGTGGTCCAA CTGGTGGTCA GCGTGCACGA CCGCGTGCAC
CTGGCGCGTG TGATCAAGAA GCTGCGTACC CTGACCGGTG TGGTCCGCAT CACCCGCATG
CGTACGTAG
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| Protein sequence | MPGIEALAER LSTYLGPEQV NLVRRAYFYA EQAHDGQRRR SGEPYVTHPL AVASILADMH
MDHQSLMAAM LHDVIEDTGI AKEALSQQFG ETVAELVDGV SKLTQMNFET KAEAQAENFQ
KMAMAMARDI RVILVKLADR LHNMRTLEVL SGEKRRRIAK ETLEIYAPIA NRLGMHTVRV
EFEDLGFKAM HPMRSSLIHR AVKSARGNRK EIVAKIEHSL ANCLAADGIE GEVSGRQKHL
YGIYKKMRGK RRAFNEIMDV YAFRIIVDKV DTCYRVLGAV HNLYKPLPGR FKDYIAIPKA
NGYQSLHTTL FGMHGVPIEI QIRTREMEEM ANNGIAAHWL YKSNDDEQPK GSHARARQWV
KGILELQQRA GNSLEFIESV KIDLFPDEVY VFTPKGRIME LPKGSTAVDF AYAVHTDVGN
SCIACRINRR LAPLSEPLQS GSTVEIVSAP GARPNPAWLN FVVTGKARTH IRHALKQQRR
SESISLGERL LNKVLTGFDS SLEKIPPERI QAILAEYRLE LIEDLLEDIG LGNRMAYVVA
RRLLSAEGEQ LPAPEGPLAI RGTEGLVLSY AKCCTPIPGD PIVGHLSAGK GMVVHLENCR
NISEIRHNPE KCVQLSWAKD ITGEFNVELR VELEHQRGLI ALLASSVNAA DGNIEKISMD
ERDGRISVVQ LVVSVHDRVH LARVIKKLRT LTGVVRITRM RT
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