| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5337 |
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| Symbol | dut |
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| ID | 5873152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5961385 |
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| End bp | 5961840 |
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| Gene Length | 456 bp |
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| Protein Length | 151 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641550473 |
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| Product | deoxyuridine 5'-triphosphate nucleotidohydrolase |
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| Protein accession | YP_001671554 |
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| Protein GI | 167036323 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0756] dUTPase |
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| TIGRFAM ID | [TIGR00576] deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0025141 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGCACGCTC TTCAAGCCAA GATCCTCGAC CCACGCCTGG GCAGCGAATT CCCGCTGCCG
ACTTACGCAA CCCCCGGCTC CGCCGGCCTG GACCTGCGCG CCCTGCTCAA GGAAGACACC
GTCCTCGAGC CAGGCCAGAC CCTGCTGATT CCGACCGGCC TGTCGATCTA TATCGGCGAC
CCAGGCCTGG CGGCAGTCAT CCTGCCGCGC TCGGGCCTGG GCCATAAGCA CGGCATCGTG
CTGGGCAACC TGGTCGGCCT GATCGACTCG GACTACCAGG GCGAGCTGAT GGTTTCGTGC
TGGAACCGCA GCAACACGCC GTTCACCATC GCAGTTGGCG AACGTATCGC CCAGCTGGTG
CTGGTACCGG TGGTGCAGGC CCATTTCGAC ATCGTCGAAG CATTCGATGA AAGCCAGCGT
GGCGCTGGCG GCTTTGGTCA TTCCGGCAGC CACTGA
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| Protein sequence | MHALQAKILD PRLGSEFPLP TYATPGSAGL DLRALLKEDT VLEPGQTLLI PTGLSIYIGD
PGLAAVILPR SGLGHKHGIV LGNLVGLIDS DYQGELMVSC WNRSNTPFTI AVGERIAQLV
LVPVVQAHFD IVEAFDESQR GAGGFGHSGS H
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