Gene PputGB1_5329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5329 
Symbol 
ID5873144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5953561 
End bp5954700 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content65% 
IMG OID641550465 
Productmajor facilitator transporter 
Protein accessionYP_001671546 
Protein GI167036315 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2807] Cyanate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0783792 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTGGG GTACCTATTT CGCCGTACTG GCATCGGTGC TCAGCGTCGG GCTGGCGCTC 
GGCGTGAGCA TGCCGCTGGT GTCCCTGCGC CTGGAGGCCT GGGGCTACGG CAGCTTTGCC
ATCGGCGTGA TGGCGGCGAT GCCGGCGCTG GGGGTATTGG CAGGTGCCAG CCTGGCCAGC
CGCCTGGCAG GCTGGGTGGG CGTGCCTTCG GCGATGCGCC TGTGCCTGTG GGGTGGGGCG
CTGTCGATCG GCCTGCTCGC ACTGTTGCCC AGTTACCCGC TGTGGCTGCT GCTGCGGCTG
ATGATCGGCA TGTCCCTGAC CGTGGTGTTT ATCCTCGGCG AAAGCTGGAT CAACCAATTG
GTGGTCGAGC AGTGGCGTGG CCGGTTGGTG GCGCTGTATG GCAGCAGCTA CGCCCTGAGC
CAGCTGGCCG GGCCGTTGGT GCTGGGCTTT CTCGGCTCTG ATGACGACTT CGGTTTCTGG
GCCGCGACCG GCCTGTTGCT GGCCGCGCCG CTGGTGCTGC TGGGGCGTGG CGGTGCGCCG
AGCACCGAAG CCTGCAGTGT CACCTTCCGC GACCTGTTCG CCTTCTGCCG GCGTTTGCCG
GTAATCGCCT GGGCCATTGC CCTGTTCGCT TCGTTCGAGG CGATGATCCT CACCTTGCTG
CCGGTGTATT GCCTGCAGCA GGGCTTCAGC ACCGAAATCG CCCTGTTCAT GGTCAGTACC
GTGGTGGTGG GTGATGCAGT GTTGCAGTTG CCTATCGGCG CGCTGGCTGA CCATATGTCG
CGCCGTACGC TGTTTACAGG CTGTGCAGTG ACGTTGCTGG TTTCCAGCCT GGCGATTCCG
CTGCTGTTGC ATACGCCGGT GATCTGGCCG TTGTGGGTGT TGTTCGGCGC CAGTGCTGGT
GGCCTGTTTA CCCTGTCGCT GGTGCTGATT GGCGAGCGCT ACCGGGATGA TGAATTGGTG
CGGGCCAATG CCCATGTTGC GCAGTTGTGG GGTATTGGCT GCTTGCTCGG GCCTTTGCTG
GCGGGGGCGG GGAGCCAGTG GGTCAGCGGG CATGCGTTGT TGTTCCTGAT GGCAGCAGGG
GCTGCCGGGC TGGTGGTGTT GACCCAGCGG CGCGGGGCTT TCGAGGCAGT GTCTGCCTGA
 
Protein sequence
MRWGTYFAVL ASVLSVGLAL GVSMPLVSLR LEAWGYGSFA IGVMAAMPAL GVLAGASLAS 
RLAGWVGVPS AMRLCLWGGA LSIGLLALLP SYPLWLLLRL MIGMSLTVVF ILGESWINQL
VVEQWRGRLV ALYGSSYALS QLAGPLVLGF LGSDDDFGFW AATGLLLAAP LVLLGRGGAP
STEACSVTFR DLFAFCRRLP VIAWAIALFA SFEAMILTLL PVYCLQQGFS TEIALFMVST
VVVGDAVLQL PIGALADHMS RRTLFTGCAV TLLVSSLAIP LLLHTPVIWP LWVLFGASAG
GLFTLSLVLI GERYRDDELV RANAHVAQLW GIGCLLGPLL AGAGSQWVSG HALLFLMAAG
AAGLVVLTQR RGAFEAVSA