Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5329 |
Symbol | |
ID | 5873144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5953561 |
End bp | 5954700 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641550465 |
Product | major facilitator transporter |
Protein accession | YP_001671546 |
Protein GI | 167036315 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2807] Cyanate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.0783792 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTGGG GTACCTATTT CGCCGTACTG GCATCGGTGC TCAGCGTCGG GCTGGCGCTC GGCGTGAGCA TGCCGCTGGT GTCCCTGCGC CTGGAGGCCT GGGGCTACGG CAGCTTTGCC ATCGGCGTGA TGGCGGCGAT GCCGGCGCTG GGGGTATTGG CAGGTGCCAG CCTGGCCAGC CGCCTGGCAG GCTGGGTGGG CGTGCCTTCG GCGATGCGCC TGTGCCTGTG GGGTGGGGCG CTGTCGATCG GCCTGCTCGC ACTGTTGCCC AGTTACCCGC TGTGGCTGCT GCTGCGGCTG ATGATCGGCA TGTCCCTGAC CGTGGTGTTT ATCCTCGGCG AAAGCTGGAT CAACCAATTG GTGGTCGAGC AGTGGCGTGG CCGGTTGGTG GCGCTGTATG GCAGCAGCTA CGCCCTGAGC CAGCTGGCCG GGCCGTTGGT GCTGGGCTTT CTCGGCTCTG ATGACGACTT CGGTTTCTGG GCCGCGACCG GCCTGTTGCT GGCCGCGCCG CTGGTGCTGC TGGGGCGTGG CGGTGCGCCG AGCACCGAAG CCTGCAGTGT CACCTTCCGC GACCTGTTCG CCTTCTGCCG GCGTTTGCCG GTAATCGCCT GGGCCATTGC CCTGTTCGCT TCGTTCGAGG CGATGATCCT CACCTTGCTG CCGGTGTATT GCCTGCAGCA GGGCTTCAGC ACCGAAATCG CCCTGTTCAT GGTCAGTACC GTGGTGGTGG GTGATGCAGT GTTGCAGTTG CCTATCGGCG CGCTGGCTGA CCATATGTCG CGCCGTACGC TGTTTACAGG CTGTGCAGTG ACGTTGCTGG TTTCCAGCCT GGCGATTCCG CTGCTGTTGC ATACGCCGGT GATCTGGCCG TTGTGGGTGT TGTTCGGCGC CAGTGCTGGT GGCCTGTTTA CCCTGTCGCT GGTGCTGATT GGCGAGCGCT ACCGGGATGA TGAATTGGTG CGGGCCAATG CCCATGTTGC GCAGTTGTGG GGTATTGGCT GCTTGCTCGG GCCTTTGCTG GCGGGGGCGG GGAGCCAGTG GGTCAGCGGG CATGCGTTGT TGTTCCTGAT GGCAGCAGGG GCTGCCGGGC TGGTGGTGTT GACCCAGCGG CGCGGGGCTT TCGAGGCAGT GTCTGCCTGA
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Protein sequence | MRWGTYFAVL ASVLSVGLAL GVSMPLVSLR LEAWGYGSFA IGVMAAMPAL GVLAGASLAS RLAGWVGVPS AMRLCLWGGA LSIGLLALLP SYPLWLLLRL MIGMSLTVVF ILGESWINQL VVEQWRGRLV ALYGSSYALS QLAGPLVLGF LGSDDDFGFW AATGLLLAAP LVLLGRGGAP STEACSVTFR DLFAFCRRLP VIAWAIALFA SFEAMILTLL PVYCLQQGFS TEIALFMVST VVVGDAVLQL PIGALADHMS RRTLFTGCAV TLLVSSLAIP LLLHTPVIWP LWVLFGASAG GLFTLSLVLI GERYRDDELV RANAHVAQLW GIGCLLGPLL AGAGSQWVSG HALLFLMAAG AAGLVVLTQR RGAFEAVSA
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