| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5327 |
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| Symbol | |
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| ID | 5873142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5950417 |
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| End bp | 5951907 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641550463 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001671544 |
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| Protein GI | 167036313 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.898471 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.06298 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTATT TTCACCCCAA CTGTACCGGT CGCTATGCCA ATGCAGCGCA GGAGTATGCC
GTGACCCTTT ACCTGAACCT CGCCGAACTA CTCGGCGCCC GCATCGAGCA GGGCCTGTAC
CGCCCCGGCC AACGCCTGCC GTCGGTACGA GCCCTGAGCG TGGAGCATGG GGTCAGCCTA
AGCACCGTGC AGCAGGCCTA TCGCATGCTC GAAGACAGCG GCATGGTCTC GCCACGGCCC
AAGTCCGGCT ACTTCGTCAG TGACCACCGC CACCTGCCGG CCCTGCCTGC CGTCAGCCGC
CCGGCCCAGC GCCCGGTGGA TATTTCACAG TGGGAGCAGG TGCTGGAGCT GATACGCAGC
ACCCCGCGCA AGGACGTGAT CCAGCTTGGT CGTGGCATGC CCGACATCGA CAGCCCCACC
CTGAAGCCGC TGCTGCGCAG CCTCGCCCAG CTGAGCCGGC GCCAGGACAT GCCTGGCCTG
TACTACGACA ACATCCATGG CAACCTGGCC CTGCGCGAAC AGGTGGCCCG GCTGGTGCTC
GACTCCGGCT GCCGCCTGGG TGCTGCCGAC CTGGTGATCA CCACCGGCTG CCATGAGGCG
TTGTCCTGCA GCATCCGAGC GGTTTGCGAG CCTGGCGACA TCGTTGCGGT CGACTCGCCG
AGCTTCCACG GCGCCATGCA AACCCTCAAG GGCCTGGGCA TGAAAGCGCT GGAAATCCCC
ACTGACCCGG TCACCGGCAT CAGCCTGGAA GCGCTGGAGC TGGCTCTGGA GCAGTGGCCG
ATCAAACTCA TCCAGATCAC CCCCAGCTGC AACAACCCGC TGGGTTACAT CATGCCCGAG
GCGCGCAAGA AGGCCCTGCT GAGCCTGGCT CAACGCTATG ACGTGGCGAT TCTGGAAGAC
GATGTGTACG GCGACCTGGC CTACACCTAC CCGCGCCCGC GCACCCTCAA GTCGTTCGAC
GACGATGGCC GCGTGCTGCT CTGCAGCTCG TTCTCCAAGA CCCTCGCCCC CGGCCTGCGG
GTCGGCTGGG TGGCGCCCGG GCGCTACCTG GAGCGCGTGC TGCACATGAA GTACATCAGC
ACTGGCAGCA GCGCCAGCCA GCCGCAACTG GCCATCGCCG ACTTCATCGC CGGCGGGCAC
TACCAGCCCC ACGTGCGGCG CATGCGTAGC CAGTACCAGC GTGGCCGCGA CCTGATGAGC
GACTGGGTAA CCCGTTATTT CCCGCCAGGC ACCCGGGTCA GCCGGCCCCA GGGCGGCTTC
ATGCTGTGGG TGGAATTACC CGAACATTTC GATACGCTGC GGCTAAACCG CGCTTTACTG
GAGCAGGGCG TGCAGGTTGC CGTAGGCAGC ATCTTCTCGG CCTCGGGCAA GTTCCGCCAC
TGCCTGCGCA TGAACTTCGC CGCGCGGCCG ACGCCGCAGA TCGAAGCCGC CGTGCGCAAG
GTAGGTGAAA CCGCCCTTCG TCTACTGGAT GAAGAAAGCG CCGACGCGTA A
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| Protein sequence | MLYFHPNCTG RYANAAQEYA VTLYLNLAEL LGARIEQGLY RPGQRLPSVR ALSVEHGVSL
STVQQAYRML EDSGMVSPRP KSGYFVSDHR HLPALPAVSR PAQRPVDISQ WEQVLELIRS
TPRKDVIQLG RGMPDIDSPT LKPLLRSLAQ LSRRQDMPGL YYDNIHGNLA LREQVARLVL
DSGCRLGAAD LVITTGCHEA LSCSIRAVCE PGDIVAVDSP SFHGAMQTLK GLGMKALEIP
TDPVTGISLE ALELALEQWP IKLIQITPSC NNPLGYIMPE ARKKALLSLA QRYDVAILED
DVYGDLAYTY PRPRTLKSFD DDGRVLLCSS FSKTLAPGLR VGWVAPGRYL ERVLHMKYIS
TGSSASQPQL AIADFIAGGH YQPHVRRMRS QYQRGRDLMS DWVTRYFPPG TRVSRPQGGF
MLWVELPEHF DTLRLNRALL EQGVQVAVGS IFSASGKFRH CLRMNFAARP TPQIEAAVRK
VGETALRLLD EESADA
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