| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5322 |
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| Symbol | |
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| ID | 5873137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5946166 |
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| End bp | 5947470 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641550458 |
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| Product | D-amino acid dehydrogenase small subunit |
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| Protein accession | YP_001671539 |
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| Protein GI | 167036308 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.116126 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGTTT TGGTACTTGG TAGCGGTGTA ATCGGAACCG CCAGTGCCTA TTACCTGGCC
CGGCAAGGTT TTGAAGTGAC GGTGGTCGAC CGCCAGCCGG CGGTGGCCAT GGAAACCAGC
TTTGCCAACG CCGGCCAGAT CTCGCCCGGC TACGCCTCGC CCTGGGCCGC CCCTGGTGTA
CCACTGAAGG CCATCAAGTG GCTGCTCGAA CGCCACGCGC CCCTGGCCAT CAAGCTCACC
GGCGACGTCG ATCAGTACCT GTGGATGGCG CAGATGCTGC GCAACTGCAC CGCCAGCCGT
TACGCGGTGA ACAAGGAGCG CATGGTGCGT CTGTCCGAGT ACAGCCGTGA CTGCCTCGAT
GAACTGCGCG CCGAAACCGG CATCAACTAC GAAAACCGCA GCCTGGGTAC CACCCAGCTG
TTCCGCACCC AGGCCCAGGT GGATGCCGCG GCCAAGGACA TTGCCGTGCT CGAGCAGTCC
GGCGTGCCTT ACGAGCTGCT CGACCGCGAC GGCATTGCCC GCGTCGAACC TGCCCTGGCC
GGCGTCAAAG ACATCCTGGC CGGTGCCCTG CGCCTGCCAA ATGATCAGAC GGGCGACTGC
CAGCTGTTCA CCACCAAACT GGCCGACATG GCGCTGAAAC TGGGCGTGGA GTTCCGCTTC
GGCCAGGACA TCCAGCGCCT GGACTTCGCA GGCGACCGCA TCAATGGTGT GTGGATCGAC
GGCAAGCTGG AAACTGCCGA CCGCTATGTG CTGGCGCTGG GCAGCTACTC GCCGCAGATG
CTCAAGCCGC TGGGCATCAA AGCCCCGGTG TACCCGCTGA AAGGCTACTC GCTGACCGTG
CCGATCACCA ACGGCGACAT GGCGCCGACG TCGACCATCC TCGACGAAAC CTACAAAGTC
GCCATCACCC GTTTCGACAA CCGCATCCGT GTCGGCGGCA TGGCTGAAAT CGCCGGTTTT
GACCTGTCGC TGAACCCGCG TCGGCGCGAA ACGCTGGAGA TGATCGTCAA CGACCTTTAT
CCTCGCGGCG GTGACCTGAG CCAGGCCAGC TTCTGGACCG GCCTGCGCCC GGCGACCCCG
GACGGCACGC CAATCGTTGG CGCCACAGCG TTCCGTAACC TGTTCCTGAA CACCGGTCAC
GGTACCTTGG GCTGGACCAT GGCGTGTGGC TCCGGTCGCC TGCTGGCCGA CCTGATCGCG
CGCAAGAAGC CGCAGATCAG TGCCGAAGGC CTGGACATTT CCCGTTATGG CAACAGCCGG
GAAGTGGCCA AGCACGGGCA GACCGCGCCG GCTCACCAGC AGTAA
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| Protein sequence | MRVLVLGSGV IGTASAYYLA RQGFEVTVVD RQPAVAMETS FANAGQISPG YASPWAAPGV
PLKAIKWLLE RHAPLAIKLT GDVDQYLWMA QMLRNCTASR YAVNKERMVR LSEYSRDCLD
ELRAETGINY ENRSLGTTQL FRTQAQVDAA AKDIAVLEQS GVPYELLDRD GIARVEPALA
GVKDILAGAL RLPNDQTGDC QLFTTKLADM ALKLGVEFRF GQDIQRLDFA GDRINGVWID
GKLETADRYV LALGSYSPQM LKPLGIKAPV YPLKGYSLTV PITNGDMAPT STILDETYKV
AITRFDNRIR VGGMAEIAGF DLSLNPRRRE TLEMIVNDLY PRGGDLSQAS FWTGLRPATP
DGTPIVGATA FRNLFLNTGH GTLGWTMACG SGRLLADLIA RKKPQISAEG LDISRYGNSR
EVAKHGQTAP AHQQ
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