| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5321 |
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| Symbol | dadX |
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| ID | 5873136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5944946 |
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| End bp | 5946019 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641550457 |
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| Product | alanine racemase |
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| Protein accession | YP_001671538 |
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| Protein GI | 167036307 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0787] Alanine racemase |
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| TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.274538 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCCCG CCCGCGCCCT GATCGACCTC CAGGCCCTGC GCCACAACTA CCGTCTGGCC
CGTGAACTGA CCGGTGCCAA AGCCCTCGCC GTGATCAAGG CCGATGCCTA TGGCCACGGT
GCCGTGCGCT GCGCCCTGGC CCTGGAGGCC GAAGCCGACG GCTTCGCCGT GGCCTGCATC
GAAGAGGCGC TGGAGCTGCG CGCCGCCGGT ATCAAGGCCC CGGTGCTGTT GCTGGAAGGC
TTTTTCGAAG CCAGCGAGCT GGCGCTGATT GCCGAGCACG ACCTGTGGTG CGTGGTGCAC
TCGCTGTGGC AGCTCGAAGC CATCGAGAAA ACCCAGCTGC ACAAGCCGCT CACCGTTTGG
CTGAAGCTAG ACAGCGGCAT GCACCGTGTT GGCCTGCACC CCAAGGACTA CCACGACGCC
TATCAGCGTC TGCTGGCCAG CGGCAAGGTT TCGCGCATCG TATTGATGAG CCACTTCGCC
CGTGCCGACG AGCTGGACGC TGATGCTACC GCCCAGCAGA TCGCCGTGTT CGAGGCCGCC
CGCCAGGGCC TGGCGGCCGA ATGCAGCCTG CGCAACTCGC CCGGCGTGCT GGGTTGGCCG
CAGGCGCCCA GTGACTGGGT ACGCCCGGGC CTGATGCTGT ACGGCGCCAC GCCGTTCGAA
GTGCCCCAGG CAGAAGCCGC GCGGTTGCAG CCGGTGATGA CCCTGCAATC TCGGGTGATC
AGCGTGCGTG AGTTGCCTGC CGGCGAGCCG GTAGGCTATG GCGCCAAGTT CGTCAGCCCA
CGGCCAACCC GCGTTGGTGT GGTCGCCATG GGCTACGCCG ATGGTTACCC ACGCCAGGCG
CCCAACGGCA CCCCAGTGCT GGTCGCCGGC CAGCGCACCC AGCTGATTGG CCGGGTGTCG
ATGGACATGC TCAACATCGA CCTGACCGAC GTGCCTCAAG CCACCGTCGG CAGCCCGGTC
GAACTGTGGG GCAAGCAGGT GCTGGCCAGC GAAGTGGCCG CACAGGCGGG CACCATTCCG
TACCAGATCT TCTGCAACTT GAAGCGGGTG CCGCGGGACT ACATCGGCGA ATGA
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| Protein sequence | MRPARALIDL QALRHNYRLA RELTGAKALA VIKADAYGHG AVRCALALEA EADGFAVACI
EEALELRAAG IKAPVLLLEG FFEASELALI AEHDLWCVVH SLWQLEAIEK TQLHKPLTVW
LKLDSGMHRV GLHPKDYHDA YQRLLASGKV SRIVLMSHFA RADELDADAT AQQIAVFEAA
RQGLAAECSL RNSPGVLGWP QAPSDWVRPG LMLYGATPFE VPQAEAARLQ PVMTLQSRVI
SVRELPAGEP VGYGAKFVSP RPTRVGVVAM GYADGYPRQA PNGTPVLVAG QRTQLIGRVS
MDMLNIDLTD VPQATVGSPV ELWGKQVLAS EVAAQAGTIP YQIFCNLKRV PRDYIGE
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