Gene PputGB1_5320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5320 
Symbol 
ID5873135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5944288 
End bp5944836 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content60% 
IMG OID641550456 
ProductXRE family transcriptional regulator 
Protein accessionYP_001671537 
Protein GI167036306 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.8166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.310919 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACGTCG GCGAACGACT GCAAGCCATC CGCAAGCTCA AGGGCCTGTC CCAGCGCGAA 
CTCGCCAAGC GTGCCGGCGT GACCAACAGC ACCATCTCGA TGATCGAGAA GAACAGCGTA
AGCCCCTCCA TCAGCTCGCT GCGCAAGGTG TTGAGTGGGA TTCCCATGTC CATGGTCGAG
TTCTTTTCGG TCGAGCTGGA ACCTGAAAGC CCCACGCAGA TCGTCTACAA GGCCCATGAG
CTGATCGATA TCTCGGACGG TGCGGTGACC ATGAAGCTGG TCGGCAAGTC GCACCCCAAT
CGTGCCATCG CCTTTCTCAC CGAGGTGTAC CCGCCAGGTG CCGACACCGG TGCCGAGATG
CTCACCCACG ACGGCGAGGA AACCGGCATC CTGCTTGAGG GGCGCCTGGA ACTGGTGGTC
GGCAACGAGA TCTTCATCCT CGAAGAAGGC GATAGCTACT ACTTTGAAAG CACCCGCCCG
CATCGCTTTC GCAACCCGTT CGACCAGCCG GCGCGGTTGA TCAGTGCGGC GACGCCTTCA
AACTTTTGA
 
Protein sequence
MDVGERLQAI RKLKGLSQRE LAKRAGVTNS TISMIEKNSV SPSISSLRKV LSGIPMSMVE 
FFSVELEPES PTQIVYKAHE LIDISDGAVT MKLVGKSHPN RAIAFLTEVY PPGADTGAEM
LTHDGEETGI LLEGRLELVV GNEIFILEEG DSYYFESTRP HRFRNPFDQP ARLISAATPS
NF