| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5314 |
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| Symbol | |
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| ID | 5873129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5935520 |
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| End bp | 5936908 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641550450 |
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| Product | multidrug efflux protein NorA |
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| Protein accession | YP_001671531 |
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| Protein GI | 167036300 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.133881 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGTCG CGCCCACCAC AGAACTCAAG GCTTTGCTGC GCCTGGCCGG GCCGCTGATT
GCCTCGCAGT TGGCGCACAT GCTGATGGTG CTGACCGACA CCCTGATGAT GGCCCGCATC
AGCCCCCAGG CCTTGGCCGG TGGTGGCCTG GGGGCGGCCA GCTACTCGTT CGTGTCGATT
TTCTGCCTGG GCGTGATCGC CGCAGTCGGC ACCCTGGTTG CAATTCGCAA GGGCGCCAAT
GACATCGAGG GTGCCACCCG CCTGGCGCAG AACGGTTTGT GGCTGGCCTG GGGCCTGGCG
CTGTTCGCCG CGCTGGTGCT GTGGAACCTT CAGCCGGTTC TGCTGCTGTT CGGGCAACAG
CCCGAAAACG TGGCCTCGGC CGCAGAATTC CTCACCCTGC TGCCGCTGGC CCTGCCCGGC
TACCTGACCT TCATGGCCTT GCGCGGCTTC ACCAGCGCAC TGGGCCGCTC GACCCCGGTG
ATGGTCATCA GCCTGGTCGG CACCGTGCTC AACTACCTGT TCAACGTGGC GTTGATCGAA
GGCATGTTCG GCCTGCCCAA GCTGGGCCTG ATGGGCATCG GCCTGGTCAC CGCCGTGGTG
TCGATGGGCA TGGCCATTGC CTTGGCATTG TATATCCGCT GGCACTCGGC CTACGCCGCC
TACCCACTGC GCAAGGGCCT GTCGCGCCCA TCGCTGCCGG CACTGCGCGA GCTGTGGCGG
CTGGGCCTGC CGATTGGCGG CACTTATATG GTGGAAGTGG GCCTGTTCGC CTTCGCCGCG
CTGTGCATGG GCGTGCTGGG CAGCACCGAA CTGGCGGCGC ACCAGATCGC CCTGCAGATC
GTGTCCACGG CGTTCATGGT ACCGACTGGC TTGTCGTATG CGGTCACCAT GCGCGTGGGC
CTGTACTACG GCGCTGGCAA CCTGCTGGCA GCACGCAGCG CCGGGCGTGT GGGCATTGGC
TTCGGGGCAA TGATCATGTT TGCCTTTGCC GCGTTGTTCC TGCTGCTGCC CGAGGCGCTG
GTGGGGCTGT TCATCGACCG CAATGACCCA GCCTTCGCCG CGATTTTCCA AGTGGCCGTG
CAGTTGTTGA TGGTGGCAGC GTGGTTCGAG CTGTTCGACG GCATGCAGAC AATTGCCATG
GGCTCGATCC GTGGGCTCAA GGACGCCAAG ACCACCTTCT TGATCGGTCT GGTGTGCTAC
TGGCTGGTGG GGGCGCCGAG CGCCTGGTTG TTCACCTTCA CCCTGGGCGG GGGAGCAGTG
GGTATCTGGT GGGGGCTGGC GCTGGGGTTG GCGTGTGCGG CGGTGGCGCT GACCTTTGGC
TTTGAGTGGC GGATGAAGCG GCTGTTGAGA AAGGCTGATT TGTCTGGTGG GACTGCGGTG
TCTGTTTGA
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| Protein sequence | MHVAPTTELK ALLRLAGPLI ASQLAHMLMV LTDTLMMARI SPQALAGGGL GAASYSFVSI
FCLGVIAAVG TLVAIRKGAN DIEGATRLAQ NGLWLAWGLA LFAALVLWNL QPVLLLFGQQ
PENVASAAEF LTLLPLALPG YLTFMALRGF TSALGRSTPV MVISLVGTVL NYLFNVALIE
GMFGLPKLGL MGIGLVTAVV SMGMAIALAL YIRWHSAYAA YPLRKGLSRP SLPALRELWR
LGLPIGGTYM VEVGLFAFAA LCMGVLGSTE LAAHQIALQI VSTAFMVPTG LSYAVTMRVG
LYYGAGNLLA ARSAGRVGIG FGAMIMFAFA ALFLLLPEAL VGLFIDRNDP AFAAIFQVAV
QLLMVAAWFE LFDGMQTIAM GSIRGLKDAK TTFLIGLVCY WLVGAPSAWL FTFTLGGGAV
GIWWGLALGL ACAAVALTFG FEWRMKRLLR KADLSGGTAV SV
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