| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5309 |
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| Symbol | |
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| ID | 5873124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5928858 |
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| End bp | 5930144 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641550445 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001671526 |
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| Protein GI | 167036295 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0571231 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAAC TGCGTCAAGA ATGCTTGTGG GAATTCGTCA GCAAACCGAG CGTTGCCGCC
CAGGCCCTGG CCGGTGAGCA CAAGGCCGAT GTCTGCGTGA TCGGCGGCGG TATCACCGGT
CTGTCGGCAG CCATCCATCT GCTCGAACAG GGCAAGTCGG TGATCTTGCT GGAGGCGTGG
AAGATCGGCC ACGGTGGTTC CGGGCGCAAC GTCGGCCTGG TCAACGCTGG CACCTGGATC
CGCCCCGACG ACGTCGAGGC CACCCTCGGC CAGAAGCAAG GCAGCCGCCT GAACAAGGTG
CTTGGCGAAG CCCCGGCTGA AGTGTTCGCC ATGATCGAAC GCCTTGGCAT CGACTGCCAG
GCCCAGCACA AAGGCACGCT GCACATGGCG CATAACGCCA CGGGCATCGC CGACCTCGAA
GCCCGCCACG AACAATGGCG CCGCCGTGGT GCCGACGTCG AGCTGCTGAC CGGCGCCCAA
TGCCAGGAAT ACTGCGGCAC CAACAAGATC TCTGCCGCGC TGCTCGACCG CCGCGCCGGC
ACCATCAACC CGATGGGCTA CACCCAGGGC CTGGCCGCCG CCGTGGCCCG CCTGGGCGGC
AAGCTGTTCC AGCAGTCTTC GGTCGAAGGC CTGGAGCGTG ACGGCGATGC CTGGCGGGTG
AAGACTGCGC GGGGTTCGGT GCGCGCCGAC AAGGTGGTGA TTTCCACTGG TGCCTACACC
GAAGGCGACT GGAGCAACCT GCAGAAGCAG TTTTTCCGCG GTTACTACTA CCAGGTGGCT
TCCAAGCCTT TGCAAGGCGC AGCCGCCGAC AAGGTGCTGC CGCATGGCCA GGGCTCGTGG
GACACCCGCA CCGTGCTCAG CAGCATCCGC CGCGACGACC AGGGCCGCCT GCTGCTCGGC
AGCCTGGGCC GGGTCGACAA CAAGCCAGCG TGGTTCGTGC GCAGCTGGGC GGACCGGATC
CAAAGCCACT ACTACCCGGA ACTGGGCAAG GTCGAGTGGG AAATGCACTG GACCGGTTGC
ATCGACTTCA CCCCCGACCA CCTGATGCGC CTGTTCGAGC CGGCGCCGGG GCTGGTGGCG
GTGACGGGGT ACAACGGGCG GGGCAATACC ACGGGCACCG TGATCGGTCG GGCATTTGCC
GAGTTTTTGC TGAAAGGGGA AGCGGACAGC CTGCCGATTC CGTTTTCGCC CATGAGCGGG
GTGAGTGCGC CTTCATTGCG CACCGCGTTC TATGAGTCCG GCTTCTCGCT GTACCACGCG
GGGCAATGCT TGAGAGTTGT GCTGTAA
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| Protein sequence | MSELRQECLW EFVSKPSVAA QALAGEHKAD VCVIGGGITG LSAAIHLLEQ GKSVILLEAW
KIGHGGSGRN VGLVNAGTWI RPDDVEATLG QKQGSRLNKV LGEAPAEVFA MIERLGIDCQ
AQHKGTLHMA HNATGIADLE ARHEQWRRRG ADVELLTGAQ CQEYCGTNKI SAALLDRRAG
TINPMGYTQG LAAAVARLGG KLFQQSSVEG LERDGDAWRV KTARGSVRAD KVVISTGAYT
EGDWSNLQKQ FFRGYYYQVA SKPLQGAAAD KVLPHGQGSW DTRTVLSSIR RDDQGRLLLG
SLGRVDNKPA WFVRSWADRI QSHYYPELGK VEWEMHWTGC IDFTPDHLMR LFEPAPGLVA
VTGYNGRGNT TGTVIGRAFA EFLLKGEADS LPIPFSPMSG VSAPSLRTAF YESGFSLYHA
GQCLRVVL
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