Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5291 |
Symbol | xerC |
ID | 5873106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5910054 |
End bp | 5910953 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641550427 |
Product | site-specific tyrosine recombinase XerC |
Protein accession | YP_001671508 |
Protein GI | 167036277 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4973] Site-specific recombinase XerC |
TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACGCC AGCTGGAGGC TTATTGCGCA CACCTGCGCA ACGAGCGCCA GGTATCGGAG CACACCTTGC TGGGCTACCG CCGTGACCTG GACAAGGTCA TCGCCTACTG CAAGGAACAC GGGATTGCCG ACTGGCAGGC GCTGCAGATC CAGCAACTGC GCCAGCTGAT CGCCCGCCTG CACCACCATG GCCAGTCTTC GCGCAGCCTG GCGCGGCTAC TGTCGGCCGT GCGCGGCCTG TACCGCTACC TCAACCGCGA AGGCCTGTGC CAGCACGACC CAGCCACCGG CCTGAGCGCG CCCAAGGGTG AGCGCCGCTT GCCCAAGGTG CTGGACACCG ACCGCGCTCT GCAATTGCTC GATGGCGGCG TCGACGACGA CTTCATCGCC CGACGCGACC AGGCGATCCT TGAGCTGTTC TATTCGTCGG GCCTGCGCCT GTCCGAGCTG ACCAACCTCG ACCTCGATCA CCTCGACCTC GCCGCCGGCC TGGTACAGGT ACTGGGCAAG GGCGGCAAGG CCCGCGTACT GCCTGTTGGC CGCAAGGCGC GCGAGGCGCT GCAGGCGTGG TACCGCCTGC GCGGCATTGG CAACCCGCGC GACCGCGCGG TGTTCATTAC CCGCCAGGGC AACCGCATCA GCCCCCAGGC CGTCCGGCTG CGGGTAAAGG CCGCCGGTGA GCGCGAGCTG GGCCAGCACC TGCACCCGCA CATGCTTCGC CATTCCTTCG CCAGCCATGT GCTGGAATCG TCCCAGGACC TGCGTGCGGT GCAAGAGCTG CTCGGCCATG CCGACATCAG CACCACGCAG ATCTACACCC ACCTGGACTT CCAGCACCTG GCCGCGGTGT ATGACAGCGC CCACCCTCGG GCCAAACGCA GCAAGGGCAA TGACTCATGA
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Protein sequence | MERQLEAYCA HLRNERQVSE HTLLGYRRDL DKVIAYCKEH GIADWQALQI QQLRQLIARL HHHGQSSRSL ARLLSAVRGL YRYLNREGLC QHDPATGLSA PKGERRLPKV LDTDRALQLL DGGVDDDFIA RRDQAILELF YSSGLRLSEL TNLDLDHLDL AAGLVQVLGK GGKARVLPVG RKAREALQAW YRLRGIGNPR DRAVFITRQG NRISPQAVRL RVKAAGEREL GQHLHPHMLR HSFASHVLES SQDLRAVQEL LGHADISTTQ IYTHLDFQHL AAVYDSAHPR AKRSKGNDS
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