| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5291 |
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| Symbol | xerC |
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| ID | 5873106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5910054 |
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| End bp | 5910953 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641550427 |
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| Product | site-specific tyrosine recombinase XerC |
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| Protein accession | YP_001671508 |
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| Protein GI | 167036277 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4973] Site-specific recombinase XerC |
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| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACGCC AGCTGGAGGC TTATTGCGCA CACCTGCGCA ACGAGCGCCA GGTATCGGAG
CACACCTTGC TGGGCTACCG CCGTGACCTG GACAAGGTCA TCGCCTACTG CAAGGAACAC
GGGATTGCCG ACTGGCAGGC GCTGCAGATC CAGCAACTGC GCCAGCTGAT CGCCCGCCTG
CACCACCATG GCCAGTCTTC GCGCAGCCTG GCGCGGCTAC TGTCGGCCGT GCGCGGCCTG
TACCGCTACC TCAACCGCGA AGGCCTGTGC CAGCACGACC CAGCCACCGG CCTGAGCGCG
CCCAAGGGTG AGCGCCGCTT GCCCAAGGTG CTGGACACCG ACCGCGCTCT GCAATTGCTC
GATGGCGGCG TCGACGACGA CTTCATCGCC CGACGCGACC AGGCGATCCT TGAGCTGTTC
TATTCGTCGG GCCTGCGCCT GTCCGAGCTG ACCAACCTCG ACCTCGATCA CCTCGACCTC
GCCGCCGGCC TGGTACAGGT ACTGGGCAAG GGCGGCAAGG CCCGCGTACT GCCTGTTGGC
CGCAAGGCGC GCGAGGCGCT GCAGGCGTGG TACCGCCTGC GCGGCATTGG CAACCCGCGC
GACCGCGCGG TGTTCATTAC CCGCCAGGGC AACCGCATCA GCCCCCAGGC CGTCCGGCTG
CGGGTAAAGG CCGCCGGTGA GCGCGAGCTG GGCCAGCACC TGCACCCGCA CATGCTTCGC
CATTCCTTCG CCAGCCATGT GCTGGAATCG TCCCAGGACC TGCGTGCGGT GCAAGAGCTG
CTCGGCCATG CCGACATCAG CACCACGCAG ATCTACACCC ACCTGGACTT CCAGCACCTG
GCCGCGGTGT ATGACAGCGC CCACCCTCGG GCCAAACGCA GCAAGGGCAA TGACTCATGA
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| Protein sequence | MERQLEAYCA HLRNERQVSE HTLLGYRRDL DKVIAYCKEH GIADWQALQI QQLRQLIARL
HHHGQSSRSL ARLLSAVRGL YRYLNREGLC QHDPATGLSA PKGERRLPKV LDTDRALQLL
DGGVDDDFIA RRDQAILELF YSSGLRLSEL TNLDLDHLDL AAGLVQVLGK GGKARVLPVG
RKAREALQAW YRLRGIGNPR DRAVFITRQG NRISPQAVRL RVKAAGEREL GQHLHPHMLR
HSFASHVLES SQDLRAVQEL LGHADISTTQ IYTHLDFQHL AAVYDSAHPR AKRSKGNDS
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