Gene PputGB1_5271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5271 
Symbol 
ID5873086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5888989 
End bp5889966 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content65% 
IMG OID641550408 
Productalcohol dehydrogenase 
Protein accessionYP_001671489 
Protein GI167036258 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCG TGTTGTGCAA AACCCTGGGT CCGGCGCGCG ATCTGGTACT GGAAGACGTG 
GCCAGCCCGC AGCCGAAGAA AAACGAGATC CTGCTGGACG TGCAGGCTGC CGGGGTCAAC
TTCCCCGACA CGCTGATCAT CGAAGGCAAG TACCAGTTCC AACCTCCACT ACCGTTCTCC
CCTGGCGGCG AAGCGGCGGG GGTGGTGGCT GCAGTCGGGG AAAAGGCTGG CACGTTCAAG
GTGGGCGACC GGGTCATGGC GCTGACCGGC TGGGGTGCGT TCGCCGAGCA GGTGGCGGTG
CCTTTCTACA ACGTGCTGCC GATCCCGGCG AGCATGGACT TCACCACCGC TGCGGCGTTC
GGCATGACCT ACGGCACCTC GATGCACGCC CTGCGTCAGC GCGGTCAGTT ACAAGCAGGC
GAGACCTTGC TGGTGCTGGG CGCTTCCGGT GGGGTCGGGC TGGCGGCGGT GGAAATCGGC
AAGGCCATGG GCGCGCGAGT GATCGCGGCA GCCAGCAGTG CCGAGAAACT GGCCGTGGCC
AAAGCGGCCG GGGCGGATGA GCTGATCGAC TACAGCCAGG CCAGCCTGCG CGAAGAAATC
AAGCGCCTGA CCGGCGGCCA GGGGGTCGAC GTGATCTACG ACCCGGTCGG TGGCGAGCTA
TTCGAGCAAG CGGTACGCGG GTTGGCCTGG AATGGCCGGC TGCTGGTGGT GGGTTTTGCC
AGCGGCAGCA TTCCCCAGCT GGCGGCCAAC CTGGTACTGC TCAAGGGTGC GGCGGTGCTG
GGGGTGTTCT GGGGCGCGTT TGCCCAGCGC CAGCCGCAGG ATAATGCAGC CAACTTCAAG
CAGCTTTTTG CCTGGCATGC CGAGGGCAAG TTGAAGCCAT TGGTGTCGCA GACTTATCCA
CTGGCCGAGG CTGGGGCCGC CATCGAGAAG CTGGGGCAGC GCCAGGCTGT GGGTAAGTTG
GTGGTGTTGG CCAAGTAA
 
Protein sequence
MKAVLCKTLG PARDLVLEDV ASPQPKKNEI LLDVQAAGVN FPDTLIIEGK YQFQPPLPFS 
PGGEAAGVVA AVGEKAGTFK VGDRVMALTG WGAFAEQVAV PFYNVLPIPA SMDFTTAAAF
GMTYGTSMHA LRQRGQLQAG ETLLVLGASG GVGLAAVEIG KAMGARVIAA ASSAEKLAVA
KAAGADELID YSQASLREEI KRLTGGQGVD VIYDPVGGEL FEQAVRGLAW NGRLLVVGFA
SGSIPQLAAN LVLLKGAAVL GVFWGAFAQR QPQDNAANFK QLFAWHAEGK LKPLVSQTYP
LAEAGAAIEK LGQRQAVGKL VVLAK