| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5254 |
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| Symbol | gcvT |
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| ID | 5873068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5872054 |
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| End bp | 5873136 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641550390 |
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| Product | glycine cleavage system aminomethyltransferase T |
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| Protein accession | YP_001671472 |
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| Protein GI | 167036241 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.55872 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACAGC GCACGCTTTT GTATGACCTG CACCTGGCGC TAGGCGCCAA GACGGTCGAT
TTCGGTGGCT GGGACATGCC CCTGCACTAT GGCTCGCAGG TCGAGGAGCA CCATCAGGTG
CGCAGCGACT GCGGCGTCTT CGATGTTTCC CATATGACCG TGATCGATGT CGACGGCACC
GATGCCACCG CTTGGCTGCA GCGTTTGCTG GCCAACGACG TGGCCCGCCT CGACGACGTC
GGCAAGGCAC TGTACAGCCC GCTGCTCCAC GAGCAGGGTG GGGTAATCGA CGACTTGCTC
GTCTACCGCA TGGAAAACGG CTACCGCCTG GTCACCAATG CCGCCACCCG AGCCAAAGTG
CTCGACTGGT TAGAGCAGCA GCGGGCCGGT TTCGCCGTGA ACTTCCAGCC CCGTCCCGAC
CTGGCCATCC TCGCCATCCA GGGGCCGCAT GCCCGCGAAA AGGTCGCCGC TTTGCTCAGC
CCTGCACGCG CGGCCCTGAT TCGTGAACTG CGCCCGTTCG AAGGCGTCGC CGAAGGTGAC
TGGTTCATTG CCCGCACCGG GTACACCGGT GAAGACGGCC TGGAGATCAT CTTTCCAGGC
GATCAAGCAG TGGCCTTCTT CAACGACCTG GTCGGCGCCG GCATTGCCCC GAGCGGCCTT
GGCGCCCGCG ATACGTTGCG CCTGGAAGCC GGCATGAACC TGTACGGCCA GGACATCGAC
GAAAACCACA CTCCGCTCAC TTCCAACCTG GGCTGGAGCA TCGCCTGGGA GCCCGCCGAG
CGCGACTTCA TCGGCCGTGC CGGCCTGTTG GCGGAAATCG AGCGCGGTGT GCAGGAGAAA
CTGGTCGGTC TGGTGCTGGA AGAGCGCGGC GTGCTGCGTG CCCACCAGGT GGTGCGCGTA
GCCGGGATTG GCGAAGGGGA GATCACCAGT GGTAGTTTCT CACCTACGCT GAGCAAGTCC
ATTGCCCTGG CGCGCGTACC CATGGCGACC GGTGACCGGG CCGAGGTGGA AATTCGCGGC
AAATGGTACC CGGTGCGGGT GGTCAAACCG ACCTTCGTGC GCCACGGCAA GATCCTGATC
TGA
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| Protein sequence | MGQRTLLYDL HLALGAKTVD FGGWDMPLHY GSQVEEHHQV RSDCGVFDVS HMTVIDVDGT
DATAWLQRLL ANDVARLDDV GKALYSPLLH EQGGVIDDLL VYRMENGYRL VTNAATRAKV
LDWLEQQRAG FAVNFQPRPD LAILAIQGPH AREKVAALLS PARAALIREL RPFEGVAEGD
WFIARTGYTG EDGLEIIFPG DQAVAFFNDL VGAGIAPSGL GARDTLRLEA GMNLYGQDID
ENHTPLTSNL GWSIAWEPAE RDFIGRAGLL AEIERGVQEK LVGLVLEERG VLRAHQVVRV
AGIGEGEITS GSFSPTLSKS IALARVPMAT GDRAEVEIRG KWYPVRVVKP TFVRHGKILI
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