Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5246 |
Symbol | |
ID | 5873060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5862671 |
End bp | 5863813 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641550382 |
Product | acetylornithine deacetylase |
Protein accession | YP_001671464 |
Protein GI | 167036233 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | [TIGR01892] acetylornithine deacetylase (ArgE) |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTTGC CGACGCTGAA AGACCAGTTC GCCGCCTTGA TCGCCGCGCC TTCGGTCAGT TGCACCCAGC CCGCGCTGGA CCAGTCCAAC CGCCAGGTCA TCGACCTGCT GGCGGGCTGG CTGGGCGACT TGGGTTTCAG GTGTGACATC CAACAGGTCA GCCCCGGCAA GTTCAACCTG CTGGCCAGTC GCGGCACCGG CCCGGGAGGC CTGGTGCTGG CCGGGCACAG CGATACTGTT CCGTATGACG AACAGCTGTG GGCCAGCGAC CCGCTGAAGC TGACCGAGGC CGATGGCCGT TGGGTTGGCT TGGGCAGCTG CGACATGAAG GGCTTCTTCG CCCTGGTCAT CGAAGCGGTC ATCCCGCTGC TGGAGCACGA CTTCAAGCAG CCGCTGTTGA TCCTCGCTAC CTGTGACGAA GAAAGCTCCA TGTCCGGCGC CCGCGCCCTG GCCGAGGCCG GCCAGCCTCT TGGTCGTGCG GCGGTTATCG GTGAGCCTAC CGGGCTGCGG CCGATCCGCA TGCACAAGGG CATTCTCATG GACCGCATCG ACATCCTTGG GCGCAGCGGC CATTCGTCGG ACCCAAGCCT GGGCCGCAGC GCCATGGAAG CCATGCACGC GGTGATGGGC GAGCTGATGG GCCTGCGCCA GCAATGGCAG CAAACCTACC GCAACCCGCA GTTCACCGTG CCGACCCCGA CCCTGAACTT TGGTTGCATC CACGGGGGTG ACAACCCCAA CCGTATCTGC GGCCAATGTG CCCTGGAATT CGACCTGCGG CCGCTGCCGG GCATGGACGT GGAGCAACTG CGCGCGGCCA TTCGCGAAAA GCTGGTGCCC GTGGCGGAGC GTCATGATGT ACGCATCGAC TACGCGCCAC TGTTCCCGGA GGTGCCGCCG TTCGAACAGG CCGCCGATGC CGAGCTGGTA CACGTCGCGG AACGGCTGAC CGGCCACCGC GCCGAAGCGG TGGCGTTCGG CACCGAAGCG CCTTATCTTC AGCAGCTGGG TTGCCAGACC ATCGTGCTGG GCCCTGGCGA CATCGCCTGT GCCCACCAGC CCGGCGAATA CCTTGAAATG TCACGAATCG AGCCTACCGT GCGTCTATTG CGTGACTTGA TTCGGCACTA TTGCCTGCAC TAA
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Protein sequence | MPLPTLKDQF AALIAAPSVS CTQPALDQSN RQVIDLLAGW LGDLGFRCDI QQVSPGKFNL LASRGTGPGG LVLAGHSDTV PYDEQLWASD PLKLTEADGR WVGLGSCDMK GFFALVIEAV IPLLEHDFKQ PLLILATCDE ESSMSGARAL AEAGQPLGRA AVIGEPTGLR PIRMHKGILM DRIDILGRSG HSSDPSLGRS AMEAMHAVMG ELMGLRQQWQ QTYRNPQFTV PTPTLNFGCI HGGDNPNRIC GQCALEFDLR PLPGMDVEQL RAAIREKLVP VAERHDVRID YAPLFPEVPP FEQAADAELV HVAERLTGHR AEAVAFGTEA PYLQQLGCQT IVLGPGDIAC AHQPGEYLEM SRIEPTVRLL RDLIRHYCLH
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