Gene PputGB1_5246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5246 
Symbol 
ID5873060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5862671 
End bp5863813 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content65% 
IMG OID641550382 
Productacetylornithine deacetylase 
Protein accessionYP_001671464 
Protein GI167036233 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID[TIGR01892] acetylornithine deacetylase (ArgE) 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTTGC CGACGCTGAA AGACCAGTTC GCCGCCTTGA TCGCCGCGCC TTCGGTCAGT 
TGCACCCAGC CCGCGCTGGA CCAGTCCAAC CGCCAGGTCA TCGACCTGCT GGCGGGCTGG
CTGGGCGACT TGGGTTTCAG GTGTGACATC CAACAGGTCA GCCCCGGCAA GTTCAACCTG
CTGGCCAGTC GCGGCACCGG CCCGGGAGGC CTGGTGCTGG CCGGGCACAG CGATACTGTT
CCGTATGACG AACAGCTGTG GGCCAGCGAC CCGCTGAAGC TGACCGAGGC CGATGGCCGT
TGGGTTGGCT TGGGCAGCTG CGACATGAAG GGCTTCTTCG CCCTGGTCAT CGAAGCGGTC
ATCCCGCTGC TGGAGCACGA CTTCAAGCAG CCGCTGTTGA TCCTCGCTAC CTGTGACGAA
GAAAGCTCCA TGTCCGGCGC CCGCGCCCTG GCCGAGGCCG GCCAGCCTCT TGGTCGTGCG
GCGGTTATCG GTGAGCCTAC CGGGCTGCGG CCGATCCGCA TGCACAAGGG CATTCTCATG
GACCGCATCG ACATCCTTGG GCGCAGCGGC CATTCGTCGG ACCCAAGCCT GGGCCGCAGC
GCCATGGAAG CCATGCACGC GGTGATGGGC GAGCTGATGG GCCTGCGCCA GCAATGGCAG
CAAACCTACC GCAACCCGCA GTTCACCGTG CCGACCCCGA CCCTGAACTT TGGTTGCATC
CACGGGGGTG ACAACCCCAA CCGTATCTGC GGCCAATGTG CCCTGGAATT CGACCTGCGG
CCGCTGCCGG GCATGGACGT GGAGCAACTG CGCGCGGCCA TTCGCGAAAA GCTGGTGCCC
GTGGCGGAGC GTCATGATGT ACGCATCGAC TACGCGCCAC TGTTCCCGGA GGTGCCGCCG
TTCGAACAGG CCGCCGATGC CGAGCTGGTA CACGTCGCGG AACGGCTGAC CGGCCACCGC
GCCGAAGCGG TGGCGTTCGG CACCGAAGCG CCTTATCTTC AGCAGCTGGG TTGCCAGACC
ATCGTGCTGG GCCCTGGCGA CATCGCCTGT GCCCACCAGC CCGGCGAATA CCTTGAAATG
TCACGAATCG AGCCTACCGT GCGTCTATTG CGTGACTTGA TTCGGCACTA TTGCCTGCAC
TAA
 
Protein sequence
MPLPTLKDQF AALIAAPSVS CTQPALDQSN RQVIDLLAGW LGDLGFRCDI QQVSPGKFNL 
LASRGTGPGG LVLAGHSDTV PYDEQLWASD PLKLTEADGR WVGLGSCDMK GFFALVIEAV
IPLLEHDFKQ PLLILATCDE ESSMSGARAL AEAGQPLGRA AVIGEPTGLR PIRMHKGILM
DRIDILGRSG HSSDPSLGRS AMEAMHAVMG ELMGLRQQWQ QTYRNPQFTV PTPTLNFGCI
HGGDNPNRIC GQCALEFDLR PLPGMDVEQL RAAIREKLVP VAERHDVRID YAPLFPEVPP
FEQAADAELV HVAERLTGHR AEAVAFGTEA PYLQQLGCQT IVLGPGDIAC AHQPGEYLEM
SRIEPTVRLL RDLIRHYCLH