| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5235 |
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| Symbol | |
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| ID | 5873049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5848890 |
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| End bp | 5849978 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641550371 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001671453 |
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| Protein GI | 167036222 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGGTGA CGCGTCCACT GTTGCTGGCA AGCTTGGGCT TGCTGTCCAT GCTCACCGGT
TGTAGCAAGG AAGAGGTTCC CGAGACGCTG CCTCGGGTGG GTGTGCAACA GGTCCAGCCC
ACCGATTTCG CTGCCAGGGT CACCCTGACC GGCGATGTGC AGGCGCGGGT GCAGACCGAC
CTCTCGTTCC GCGTAGGCGG CAAGATCATT TCGCGCAGCG TGGACGTGGG CGACCACGTC
AAGGCCAACC AGGTGCTGGC GCGGCTGGAC CCAAAAGACT TGCAGAACAA CGTCGACTCG
GCCAAGGCCG AGGTGTTCGC CGCGCAAGCG CGGGTCACCC AGACCAGTGC CGCCTTCGTG
CGCCAGCAGA AACTGCTACC CAAGGGCTAC ACCAGCCAGA GTGAATACGA CTCCGCCGAA
GCCGCGTTGC GCAGCAACCA GAGCGCCCTC AAGGCCGCCC AGGCGCAGCT GGCCAACGCC
AACGAACAAC TCAGCTATAC CGCACTGGTC TCCGAGGCCG CTGGGGTAAT CACTCAGCGC
CAGGCCGAAG TCGGGCAGGT GGTACAGGCC ACCATGCCGA TCTTCAGCCT GGCTACCGAT
GGCGACCGCG ATGCGGTGTT CAACGTCTAC GAGTCGCTGC TGGTCGCGCC GCCCAGCGAT
GCCGGGGTGG TCGTCAGCCT GTTGGACGAC CCCAAGGTCC AGGCCCATGG CTTCGTGCGC
GAAATCACCC CCACGGTGTC GGCGCAAAGC GGCACGGTGC AGGTCAAGGT TGGCCTGAAA
GACGTGCCAC CGGGCATGCA ACTGGGCGCA CCGGTCACTG CTACCACCAA CGCTCAGGGC
CGGCCCAGCG TCGAACTGCC GTGGTCGGCG TTGACCAAGG CCTTGCATGA ACCCGCCGTG
TGGGTGGTGG GCGAGGGCGA CAAGGTGGAG CTGCGCAAAG TTGAAGTCAG CCGTTACCTC
ACCGGCAAGA TCGTGGTCGC CAGCGGCCTC AAAGGCGGCG AGAGCGTGGT GGTCAACGGC
GGCCAGTTGC TGCACCCCGG CATGCAGGTG CAGAAGGTCG ATGCCAAGGC CCCAGGGGGT
GAGTTATGA
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| Protein sequence | MRVTRPLLLA SLGLLSMLTG CSKEEVPETL PRVGVQQVQP TDFAARVTLT GDVQARVQTD
LSFRVGGKII SRSVDVGDHV KANQVLARLD PKDLQNNVDS AKAEVFAAQA RVTQTSAAFV
RQQKLLPKGY TSQSEYDSAE AALRSNQSAL KAAQAQLANA NEQLSYTALV SEAAGVITQR
QAEVGQVVQA TMPIFSLATD GDRDAVFNVY ESLLVAPPSD AGVVVSLLDD PKVQAHGFVR
EITPTVSAQS GTVQVKVGLK DVPPGMQLGA PVTATTNAQG RPSVELPWSA LTKALHEPAV
WVVGEGDKVE LRKVEVSRYL TGKIVVASGL KGGESVVVNG GQLLHPGMQV QKVDAKAPGG
EL
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