| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5220 |
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| Symbol | |
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| ID | 5873034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5833835 |
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| End bp | 5834494 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641550356 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001671438 |
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| Protein GI | 167036207 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGTT CGGCGTTTGA CCTGTTGCTG CAGGCGCTGC CGCAGCTGGC CGGCGGCGCC
GCGCAGACCC TGGCCATCTC GGCACTGGGC ATCCTCTTCG CAACGCTGGG TGGCGTGCTG
TACGGCGTGC TGGCAACCCT GGGCAACCGT GCCCTGAACA TCGCCTTGCA GGTGTACCTT
GAGTTGTTTC GCGCCATCCC GGTGCTGGTC TGGTTGTACC TGGTGTTCTT CGGCCTGCCG
ATCTTCTTTG CCCTGAGCAT CCCCAGCTTC TGGTGCGCGG TGCTGGTACT GGCCCTGTGG
GGCGCGAGCG AGGTGGGCGA GGTGGTACGC GGTGCGCTGC GTTCGCTGCC GCGCGGCCAG
CGCGAAGCCG GGCTGTCGAT CGGCCTGGCG GGGTGGCAGC TGTATGGCTA CGTGCTGCTG
CCGCAGGCGC TCAAGCGCAT GACCCCGCCC ACCATCAACA TCTACACGCG GATCATCAAG
ACCAGCTCGC TGGCGGTGCT GATCGGCGTG GTCGAGGTGA TCAAGGCCGG TCAGCAGATC
ATCGAACGCA CCTACGAATC GGTGCTGATC TATGGCGCCT TGTTCCTGTT CTTCTTCATC
GTTTGTTATC CGCTGTCCGC CGCTTCGCGC GTGCTGGAAC GCCGCTGGGC ACACTCATGA
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| Protein sequence | MASSAFDLLL QALPQLAGGA AQTLAISALG ILFATLGGVL YGVLATLGNR ALNIALQVYL
ELFRAIPVLV WLYLVFFGLP IFFALSIPSF WCAVLVLALW GASEVGEVVR GALRSLPRGQ
REAGLSIGLA GWQLYGYVLL PQALKRMTPP TINIYTRIIK TSSLAVLIGV VEVIKAGQQI
IERTYESVLI YGALFLFFFI VCYPLSAASR VLERRWAHS
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