Gene PputGB1_5218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5218 
Symbol 
ID5873032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5832196 
End bp5833068 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content61% 
IMG OID641550354 
Productextracellular solute-binding protein 
Protein accessionYP_001671436 
Protein GI167036205 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACTG CCAACTTCAC CAAACTGCTG GCACCGTTGT TCGGCCTGGC CTTGCTGGCC 
GGCTGCAACA AGGCCGACGA ACCGCCCAAG CCGGCGGCGG CATCGCCAGC CACCAGCTAC
CTGGAAACCA TCAAGGCCCG CGACAAGCTG ATTGTCGGCG TGTTCACCGA CAAGCCGCCG
TTCGGCTTCG TCGATGAGAA AGGCCGCTAT GTGGGCTTTG ACACCGACAT TGGCCGGCGC
CTGGCCAAGG ACCTGCTGGG CGATGAAAAC AAGGTCGAGT TCGTTGCCGT GGAACCGGCC
AGCCGTATTC CGTTCCTGCA GAGCGACAAG GTCGACCTGA TCCTCGCCAA CATGACCGTG
ACCCCGGAGC GCAAGGAAGC GGTGGACTTC ACCAACCCCA ACCTGCGCGT TGCCGTGCAG
GCCATCGTGG CGGATGGCAG CCCGGTGCAG AAGCTCGACG ACCTGGCCGA CAAGACCATC
ATCGTGACCA CCGGCACCAC GGCCGATATC TGGCTGACCA AAAATCATCC CGACTGGAAG
CTGCTCAAGT TCGAGAAGAA CAGCGAATCG CTGCAAGCCC TGGCCACCGG CCGTGGCGAT
GCCTATGCCC AGGACAACCT GATCCTGTTC AGCTGGGCCA AGCAGAACCC GGGTTACCGC
GTGCTGCCTG AGCTGCTGGG TGACGAAGCG CCGATTGCGC CGGCGGTGAA GAAGGGCAAC
ACCGAGCTGC GAGACTGGGT GAATGCCGAG TTGGCCAAAC TGGGGGAAGA GAAGTTCTTG
CTGAAGCTGT ATGACCAGTA TGTGCGCAAG GAACTGAGCG ATGACACCAA GCCGGAAAGC
GTGATCGTCG AAGGGGGCAA GTGGCAGGGT TGA
 
Protein sequence
MKTANFTKLL APLFGLALLA GCNKADEPPK PAAASPATSY LETIKARDKL IVGVFTDKPP 
FGFVDEKGRY VGFDTDIGRR LAKDLLGDEN KVEFVAVEPA SRIPFLQSDK VDLILANMTV
TPERKEAVDF TNPNLRVAVQ AIVADGSPVQ KLDDLADKTI IVTTGTTADI WLTKNHPDWK
LLKFEKNSES LQALATGRGD AYAQDNLILF SWAKQNPGYR VLPELLGDEA PIAPAVKKGN
TELRDWVNAE LAKLGEEKFL LKLYDQYVRK ELSDDTKPES VIVEGGKWQG