| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5208 |
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| Symbol | |
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| ID | 5873022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5822902 |
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| End bp | 5824131 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641550344 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_001671426 |
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| Protein GI | 167036195 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGA CTTCTCTCGA CAAGAGCAAG ATCCGGTTCC TTCTTCTTGA AGGTGTGCAC
CAGAACGCAG TCGATACCCT CAAGGCTGCC GGCTACACCA ACATCGAATA CCTCACTGGT
TCGTTGCCGG AAGCCGAGCT GAAGGAAAAG ATCGCCGATG CCCACTTTAT CGGCATCCGT
TCACGCACCC AGCTTACCGA AGAGATCTTC GACTGCGCCA AGAAACTGGT CGCTGTTGGC
TGCTTCTGCA TCGGCACCAA CCAGGTTGAC CTGGAAGCTG CCCGCCAGCG CGGTATCGCC
GTGTTCAACG CGCCATACTC CAACACCCGT TCGGTCGCCG AGCTGGTACT GGCCGAGGCC
ATCCTGCTGC TGCGCGGCAT CCCAGAGAAA AACGCTTCCT GCCACCGTGG TGGCTGGATC
AAGAGTGCGG CCAACTCGTT CGAAATCCGT GGCAAGAAAC TGGGCATCGT CGGCTACGGC
TCGATCGGTA CCCAGCTGTC GGTCCTGGCC GAAAACCTGG GCATGCAGGT GTACTTCTAC
GACCCGCTGA CCAAACTGCC ACTGGGCAAC GCCGTGCAGG TTACCAGCCT GAACGAGCTG
CTGGGCCTGG CCGACATCGT CTCGCTGCAC GTGCCTGAGC TGCCGTCCAC CCAGTGGATG
ATCGGCGAGA AGGAGATCCG CGCGATGAAA AAAGGCGCGA TCCTGATCAA CGCCGCCCGT
GGCACCGTGG TCGAACTGGA CCACCTGGCC GCTGCCATCA AGGACAAGCA CCTGATCGGC
GCCGCCATCG ACGTGTTCCC GATCGAGCCG CGCTCCAACG ACGAAGAGTT CGAAAGCCCG
CTGCGCGGCC TGGACAACGT GATCCTGACC CCGCACATCG GTGGTTCCAC CGCCGAAGCC
CAGGCCAACA TCGGCCTGGA AGTGGCCGAG AAGCTGGTCA AGTACAGCGA CAACGGTACT
TCGGTATCTT CGGTCAACTT CCCGGAAGTG GCCCTGCCGG CGCACCCAGG CAAGCACCGC
CTGCTGCACA TTCACGAAAA CATTCCCGGC GTACTCAGCG AGATCAACAA GGTCTTCGCC
GAGAACGGCA TCAACATCTC CGGTCAGTTC CTGCAGACCA ACGAGAAAGT CGGTTACGTG
GTAATCGACG TTGACGCCGA GTACTCGGAC CTTGCGCAAG AAAAACTGCA ACAGGTCAAG
GGCACCATCC GTTCCCGCGT GCTGTTCTAA
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| Protein sequence | MSKTSLDKSK IRFLLLEGVH QNAVDTLKAA GYTNIEYLTG SLPEAELKEK IADAHFIGIR
SRTQLTEEIF DCAKKLVAVG CFCIGTNQVD LEAARQRGIA VFNAPYSNTR SVAELVLAEA
ILLLRGIPEK NASCHRGGWI KSAANSFEIR GKKLGIVGYG SIGTQLSVLA ENLGMQVYFY
DPLTKLPLGN AVQVTSLNEL LGLADIVSLH VPELPSTQWM IGEKEIRAMK KGAILINAAR
GTVVELDHLA AAIKDKHLIG AAIDVFPIEP RSNDEEFESP LRGLDNVILT PHIGGSTAEA
QANIGLEVAE KLVKYSDNGT SVSSVNFPEV ALPAHPGKHR LLHIHENIPG VLSEINKVFA
ENGINISGQF LQTNEKVGYV VIDVDAEYSD LAQEKLQQVK GTIRSRVLF
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