Gene PputGB1_5197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5197 
Symbol 
ID5873011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5811177 
End bp5811923 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content65% 
IMG OID641550333 
Producthypothetical protein 
Protein accessionYP_001671415 
Protein GI167036184 
COG category[S] Function unknown 
COG ID[COG3332] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.560139 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCCTGA TCGTATTTGC CTGGCGGCCG GGGCACGCCC TGCCGCTGAT CGTGGCGGCC 
AACCGCGACG AATTCTATGC CCGCCCCACC CAGCCCCTGG CAGCCTGGGA CGATGCGCCC
GGCGTACACG CCGGGCGAGA CCTGGAAGCC GGTGGTACCT GGCTGGGCGT GGGCCCACAG
GGGCGCTTTG CCGCGCTGAC CAACATCCGC GACCCGGGCC ATGCGCTGGG GCCACGCTCG
CGGGGTGAGC TGGTGGCGGC GTACCTGCAG GGTGAAATGG GTGTCGAGGC TTACCTGGGC
CAGGTGGCCA GCCGAAGTGG GCAGTATTCG GGGTTCAACC TGCTGGTGGG TGATGGCCAG
CAGCTGGGAT ATCTGAATGC TCGGGAAGCC ACGCCGCGCC TGCTGCATGC CGGGGTGTAC
GGGTTATCCA ATGCCGGGCT GGATACGCCA TGGCCGAAGC TGGTGAAGGC ACGTAGCGGG
CTGGAGGGCC TGCTGGAAGC GCCCGAGCCG CATCGGTTGC TGGCGTTGCT GGCAGATAAC
GAGCCTGCGG CTGAGGGTGA CCTACCCGAG ACGGGCGTGG GAGTAGCGAC CGAGAAGTTG
CTGTCGAGTG TGTTTATTGC CAGCCAGAAT TATGGGACGC GGGCAAGTAC GGTGCTGATT
GTGGATGATC AGGGCAAAAG ACGACTGGTT GAGCGCAGCT TCGGGCCTTT TGGTGGGCAC
TTGGGGGAAG TTGAGCTTAC GGTCTGA
 
Protein sequence
MCLIVFAWRP GHALPLIVAA NRDEFYARPT QPLAAWDDAP GVHAGRDLEA GGTWLGVGPQ 
GRFAALTNIR DPGHALGPRS RGELVAAYLQ GEMGVEAYLG QVASRSGQYS GFNLLVGDGQ
QLGYLNAREA TPRLLHAGVY GLSNAGLDTP WPKLVKARSG LEGLLEAPEP HRLLALLADN
EPAAEGDLPE TGVGVATEKL LSSVFIASQN YGTRASTVLI VDDQGKRRLV ERSFGPFGGH
LGEVELTV