Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5197 |
Symbol | |
ID | 5873011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5811177 |
End bp | 5811923 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641550333 |
Product | hypothetical protein |
Protein accession | YP_001671415 |
Protein GI | 167036184 |
COG category | [S] Function unknown |
COG ID | [COG3332] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.560139 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCCTGA TCGTATTTGC CTGGCGGCCG GGGCACGCCC TGCCGCTGAT CGTGGCGGCC AACCGCGACG AATTCTATGC CCGCCCCACC CAGCCCCTGG CAGCCTGGGA CGATGCGCCC GGCGTACACG CCGGGCGAGA CCTGGAAGCC GGTGGTACCT GGCTGGGCGT GGGCCCACAG GGGCGCTTTG CCGCGCTGAC CAACATCCGC GACCCGGGCC ATGCGCTGGG GCCACGCTCG CGGGGTGAGC TGGTGGCGGC GTACCTGCAG GGTGAAATGG GTGTCGAGGC TTACCTGGGC CAGGTGGCCA GCCGAAGTGG GCAGTATTCG GGGTTCAACC TGCTGGTGGG TGATGGCCAG CAGCTGGGAT ATCTGAATGC TCGGGAAGCC ACGCCGCGCC TGCTGCATGC CGGGGTGTAC GGGTTATCCA ATGCCGGGCT GGATACGCCA TGGCCGAAGC TGGTGAAGGC ACGTAGCGGG CTGGAGGGCC TGCTGGAAGC GCCCGAGCCG CATCGGTTGC TGGCGTTGCT GGCAGATAAC GAGCCTGCGG CTGAGGGTGA CCTACCCGAG ACGGGCGTGG GAGTAGCGAC CGAGAAGTTG CTGTCGAGTG TGTTTATTGC CAGCCAGAAT TATGGGACGC GGGCAAGTAC GGTGCTGATT GTGGATGATC AGGGCAAAAG ACGACTGGTT GAGCGCAGCT TCGGGCCTTT TGGTGGGCAC TTGGGGGAAG TTGAGCTTAC GGTCTGA
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Protein sequence | MCLIVFAWRP GHALPLIVAA NRDEFYARPT QPLAAWDDAP GVHAGRDLEA GGTWLGVGPQ GRFAALTNIR DPGHALGPRS RGELVAAYLQ GEMGVEAYLG QVASRSGQYS GFNLLVGDGQ QLGYLNAREA TPRLLHAGVY GLSNAGLDTP WPKLVKARSG LEGLLEAPEP HRLLALLADN EPAAEGDLPE TGVGVATEKL LSSVFIASQN YGTRASTVLI VDDQGKRRLV ERSFGPFGGH LGEVELTV
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