Gene PputGB1_5196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5196 
Symbol 
ID5873010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5810265 
End bp5811047 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content63% 
IMG OID641550332 
Producthypothetical protein 
Protein accessionYP_001671414 
Protein GI167036183 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTCG TGCTCTATCT GCTGTTGGGC GCCTGTGCTG GTGTGCTGGC CGGGCTGTTC 
GGCGTGGGCG GTGGCATCAT CATCGTGCCG GTGCTGGTGT TCAGCTTCAC CTTGCAGGGC
TTCGATGCCT CGGTGTTGAC CCATCTGGCA GTCGGCACGT CACTGGCAAC CATCGTATTC
ACTTCGATCA ACGCTGTGCT CGAGCACCAC CGCAAGGGTG CCGTGCAATG GCCGATTTTC
GCCTGGATGA CCCTCGGCAT CCTGCTGGGG GCCGGCGTCG GTGCCAAGAC CGCCTCGTTG
ATCCAAGGCC CGTTGCTGCA AAAGATCATC GGTGTGTTTG CCCTGGTCAT CGCCGCGCAG
ATGGCACTGG GCCTCAAACC CAAGGCCAGC CGTGGCATCC CCGGTAAACC TGCATTGGTT
GGGGCCGGTG GGGTGATCGG CTGGGCTTCG GCCATCTTCG GCATCGGCGG TGGTTCGCTG
ACCGTGCCGT TCCTGACCTG GCGCAGCCTG CCGATGCAGC AGGCGGTGGC CACGTCCTCG
GCCTGTGGCC TGCCGATCGC CCTGGCCAGT GCCCTGAGCT TCATGCTGCT GGGTTGGCAC
GAAGAGCACC TGCCGGCCCA TAGCCTGGGT TACGTGTACC TGCCGGCGAT GATCGGCATT
GCCGTGACCA GCATGTTTTT CGCCCGCTTT GGCGCGCGTC TGGCGCACAA GCTGTCGCCC
CGTTTGTTGA AACGCCTGTT CGCAGCGCTG CTGTTCTGTG TCGGCCTCAG CTTTTTGATT
TGA
 
Protein sequence
MEFVLYLLLG ACAGVLAGLF GVGGGIIIVP VLVFSFTLQG FDASVLTHLA VGTSLATIVF 
TSINAVLEHH RKGAVQWPIF AWMTLGILLG AGVGAKTASL IQGPLLQKII GVFALVIAAQ
MALGLKPKAS RGIPGKPALV GAGGVIGWAS AIFGIGGGSL TVPFLTWRSL PMQQAVATSS
ACGLPIALAS ALSFMLLGWH EEHLPAHSLG YVYLPAMIGI AVTSMFFARF GARLAHKLSP
RLLKRLFAAL LFCVGLSFLI