Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5192 |
Symbol | |
ID | 5873006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5805598 |
End bp | 5807850 |
Gene Length | 2253 bp |
Protein Length | 750 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641550328 |
Product | heavy metal translocating P-type ATPase |
Protein accession | YP_001671410 |
Protein GI | 167036179 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCAGC CTGTCAGCCA CGACCACAAG CACTCGCACG ATCACGCCCA TGGCGATGAC GACCACGGCC ATGCTGCCCA CGGCCACAGC TGCTGCGGCT CCAAAGCCGC GCCATCGCTG GTGCAACTGA GCGAAACGGC CAGTGCCCAG GCGCAGCTCA GCCGTTTTCG CATCGACGCC ATGGACTGCC CCACCGAGCA GACGCTGATC CAGGACAAAC TGGGCAAGCT GGCCGGAATC GAGCAGCTGG AATTCAACCT GATCAACCGC GTGCTTGGCG TGCGCCATAC CTTGAACGGT ACGGCTGAAA TCGAGCGGGC CATCGACAGC CTGGGCATGA AGGCCGAGCC GATTGCTGCC GAGGACGACG GCACCACCAG CGTGGCACAA CCGGCCAAGA CCCGCTGGTG GCCGCTGGCA CTGTCGGGTA TTGCTGCGAT TACCGCCGAA ATCGTGCACT TCGCTGCGCT GGCCCCGGAA TGGGTGGTAG CGGGGCTGGC GCTGTTGGCG ATCCTCGGCT GCGGCCTGGG TACCTACAAG AAGGGCTGGA TCGCCCTGAA AAACCGCAAC CTCAACATCA ATGCCTTGAT GAGCATTGCC GTGACCGGTG CGGTGCTGAT CGGCCAGTGG CCGGAAGCAG CCATGGTGAT GGTGCTGTTC ACGGTTGCCG AGCTGATCGA AGCGCGCTCG CTGGACCGTG CGCGCAATGC CATCGGCGGG TTGATGCAGT TGGCCCCGGA CATGGCCACG GTGCAGCAGG CCGATGGCCT GTGGCGCGAG CTGGACGTGC GTGAAGTGGC CATCGGTGCG TTGGTGCGGG TGCGCCCCGG CGAACGCATC GGCCTGGACG GTGAAGTGAC CAGTGGGCAG TCCAGCGTCG ATCAGGCACC GATCACCGGT GAAAGCCTGC CTGTAGAGAA GGCAGTGGGC GACAAACTGT TCGCCGGTAC CATCAACCAG GCGGGAGCAT TGGAGTTCCG CGTTACCGCT GCTGCCGGGC AGTCTACCCT GGCGCGGATC ATCAAGGCCG TGGAGGAGGC ACAAGGCGCG CGGGCACCTA CCCAGCGCTT CGTCGACCGT TTTTCGCGCA TCTATACCCC GGTGGTGTTC GCCATTGCCC TGGCCGTGGC GGTGATCCCG CCGTTGTTCA TGGCCGGTGC CTGGTTCGAC TGGGTCTACC GTGCTCTGGT ATTGCTGGTG GTTGCGTGCC CCTGCGCATT GGTGATCTCG ACCCCGGTGA CCATCGTCAG CGGCCTGGCG GCTGCCGCGC GCAAAGGCAT CCTGATCAAG GGCGGCGTCT ATCTGGAGGG CGGCCGCCAC CTGGACTTCC TGGCCCTGGA CAAGACCGGC ACCATCACCC ACGGCAAACC GGTACAGACT GACGCCGAAG TGCTGGCGCC GCAGTTCGAA GCCCGCGCTC AAGCCCTGGC CGCCAGCCTG GGCGAGCGCT CGGACCACCC GGTGTCCCGC GCTATCGCTC AGTTCGGCAA GGCGCAAGGG CTGGCTCTAA GTGAAGTGGA TGACTTCGCC GCCCTGGGCG GGCGCGGTGT GCGTGGCACC ATCGACGGTG AGGTCTACCA CTTGGGCAAC CACCGCCTGG TCGAAGAGCT GGGCCTGTGC TCGCCAGCGC TGGAAGCCAA ACTGGATGCG CTGGAGCGTC AGGGCAAGAC CGTGGTGCTG CTGCTCGACC GTTCCGGGCC ATTGGCGCTG TTTGCCGTTG CCGACACCGT GAAGGACAGC AGCCGCCAGG CTATCGCCGA GCTGCATGAA CTGGGTATCA AGACTGTCAT GCTGACCGGT GACAATCCGC ATACCGCCCA GGCCATCGCC GCTGTGGTGG GCATCGACCG CGCCGAGGGT AACCTGCTGC CAGCCGACAA GCTGAAAACC ATCGAGGCCT TGTACGCAGA AGGCCACCGG GTGGGCATGG TCGGTGATGG TATCAACGAC GCGCCAGCTC TGGCCCGCGC CGAGATCGGT TTTGCCATGG CCGCCGCTGG TACCGACACC GCCATCGAGA CCGCCGACGT AGCGCTGATG GACGACGACT TGCGGAAAAT TCCGGCCTTC GTCAGGCTGT CGCGCCAAAG CGCGGCGATC CTCATGCAGA ACATCGTTCT GGCGTTGGGC ATCAAGGCGA TATTCCTGGC CATCACCTTT GCTGGCATGG CGACCATGTG GATGGCGGTG TTCGCCGACA TGGGCGTGAG CCTGCTGGTG GTGTTCAACG GCTTGCGCCT GTTGCGCAAA TAG
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Protein sequence | MNQPVSHDHK HSHDHAHGDD DHGHAAHGHS CCGSKAAPSL VQLSETASAQ AQLSRFRIDA MDCPTEQTLI QDKLGKLAGI EQLEFNLINR VLGVRHTLNG TAEIERAIDS LGMKAEPIAA EDDGTTSVAQ PAKTRWWPLA LSGIAAITAE IVHFAALAPE WVVAGLALLA ILGCGLGTYK KGWIALKNRN LNINALMSIA VTGAVLIGQW PEAAMVMVLF TVAELIEARS LDRARNAIGG LMQLAPDMAT VQQADGLWRE LDVREVAIGA LVRVRPGERI GLDGEVTSGQ SSVDQAPITG ESLPVEKAVG DKLFAGTINQ AGALEFRVTA AAGQSTLARI IKAVEEAQGA RAPTQRFVDR FSRIYTPVVF AIALAVAVIP PLFMAGAWFD WVYRALVLLV VACPCALVIS TPVTIVSGLA AAARKGILIK GGVYLEGGRH LDFLALDKTG TITHGKPVQT DAEVLAPQFE ARAQALAASL GERSDHPVSR AIAQFGKAQG LALSEVDDFA ALGGRGVRGT IDGEVYHLGN HRLVEELGLC SPALEAKLDA LERQGKTVVL LLDRSGPLAL FAVADTVKDS SRQAIAELHE LGIKTVMLTG DNPHTAQAIA AVVGIDRAEG NLLPADKLKT IEALYAEGHR VGMVGDGIND APALARAEIG FAMAAAGTDT AIETADVALM DDDLRKIPAF VRLSRQSAAI LMQNIVLALG IKAIFLAITF AGMATMWMAV FADMGVSLLV VFNGLRLLRK
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