Gene PputGB1_5192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5192 
Symbol 
ID5873006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5805598 
End bp5807850 
Gene Length2253 bp 
Protein Length750 aa 
Translation table11 
GC content65% 
IMG OID641550328 
Productheavy metal translocating P-type ATPase 
Protein accessionYP_001671410 
Protein GI167036179 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2217] Cation transport ATPase 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAGC CTGTCAGCCA CGACCACAAG CACTCGCACG ATCACGCCCA TGGCGATGAC 
GACCACGGCC ATGCTGCCCA CGGCCACAGC TGCTGCGGCT CCAAAGCCGC GCCATCGCTG
GTGCAACTGA GCGAAACGGC CAGTGCCCAG GCGCAGCTCA GCCGTTTTCG CATCGACGCC
ATGGACTGCC CCACCGAGCA GACGCTGATC CAGGACAAAC TGGGCAAGCT GGCCGGAATC
GAGCAGCTGG AATTCAACCT GATCAACCGC GTGCTTGGCG TGCGCCATAC CTTGAACGGT
ACGGCTGAAA TCGAGCGGGC CATCGACAGC CTGGGCATGA AGGCCGAGCC GATTGCTGCC
GAGGACGACG GCACCACCAG CGTGGCACAA CCGGCCAAGA CCCGCTGGTG GCCGCTGGCA
CTGTCGGGTA TTGCTGCGAT TACCGCCGAA ATCGTGCACT TCGCTGCGCT GGCCCCGGAA
TGGGTGGTAG CGGGGCTGGC GCTGTTGGCG ATCCTCGGCT GCGGCCTGGG TACCTACAAG
AAGGGCTGGA TCGCCCTGAA AAACCGCAAC CTCAACATCA ATGCCTTGAT GAGCATTGCC
GTGACCGGTG CGGTGCTGAT CGGCCAGTGG CCGGAAGCAG CCATGGTGAT GGTGCTGTTC
ACGGTTGCCG AGCTGATCGA AGCGCGCTCG CTGGACCGTG CGCGCAATGC CATCGGCGGG
TTGATGCAGT TGGCCCCGGA CATGGCCACG GTGCAGCAGG CCGATGGCCT GTGGCGCGAG
CTGGACGTGC GTGAAGTGGC CATCGGTGCG TTGGTGCGGG TGCGCCCCGG CGAACGCATC
GGCCTGGACG GTGAAGTGAC CAGTGGGCAG TCCAGCGTCG ATCAGGCACC GATCACCGGT
GAAAGCCTGC CTGTAGAGAA GGCAGTGGGC GACAAACTGT TCGCCGGTAC CATCAACCAG
GCGGGAGCAT TGGAGTTCCG CGTTACCGCT GCTGCCGGGC AGTCTACCCT GGCGCGGATC
ATCAAGGCCG TGGAGGAGGC ACAAGGCGCG CGGGCACCTA CCCAGCGCTT CGTCGACCGT
TTTTCGCGCA TCTATACCCC GGTGGTGTTC GCCATTGCCC TGGCCGTGGC GGTGATCCCG
CCGTTGTTCA TGGCCGGTGC CTGGTTCGAC TGGGTCTACC GTGCTCTGGT ATTGCTGGTG
GTTGCGTGCC CCTGCGCATT GGTGATCTCG ACCCCGGTGA CCATCGTCAG CGGCCTGGCG
GCTGCCGCGC GCAAAGGCAT CCTGATCAAG GGCGGCGTCT ATCTGGAGGG CGGCCGCCAC
CTGGACTTCC TGGCCCTGGA CAAGACCGGC ACCATCACCC ACGGCAAACC GGTACAGACT
GACGCCGAAG TGCTGGCGCC GCAGTTCGAA GCCCGCGCTC AAGCCCTGGC CGCCAGCCTG
GGCGAGCGCT CGGACCACCC GGTGTCCCGC GCTATCGCTC AGTTCGGCAA GGCGCAAGGG
CTGGCTCTAA GTGAAGTGGA TGACTTCGCC GCCCTGGGCG GGCGCGGTGT GCGTGGCACC
ATCGACGGTG AGGTCTACCA CTTGGGCAAC CACCGCCTGG TCGAAGAGCT GGGCCTGTGC
TCGCCAGCGC TGGAAGCCAA ACTGGATGCG CTGGAGCGTC AGGGCAAGAC CGTGGTGCTG
CTGCTCGACC GTTCCGGGCC ATTGGCGCTG TTTGCCGTTG CCGACACCGT GAAGGACAGC
AGCCGCCAGG CTATCGCCGA GCTGCATGAA CTGGGTATCA AGACTGTCAT GCTGACCGGT
GACAATCCGC ATACCGCCCA GGCCATCGCC GCTGTGGTGG GCATCGACCG CGCCGAGGGT
AACCTGCTGC CAGCCGACAA GCTGAAAACC ATCGAGGCCT TGTACGCAGA AGGCCACCGG
GTGGGCATGG TCGGTGATGG TATCAACGAC GCGCCAGCTC TGGCCCGCGC CGAGATCGGT
TTTGCCATGG CCGCCGCTGG TACCGACACC GCCATCGAGA CCGCCGACGT AGCGCTGATG
GACGACGACT TGCGGAAAAT TCCGGCCTTC GTCAGGCTGT CGCGCCAAAG CGCGGCGATC
CTCATGCAGA ACATCGTTCT GGCGTTGGGC ATCAAGGCGA TATTCCTGGC CATCACCTTT
GCTGGCATGG CGACCATGTG GATGGCGGTG TTCGCCGACA TGGGCGTGAG CCTGCTGGTG
GTGTTCAACG GCTTGCGCCT GTTGCGCAAA TAG
 
Protein sequence
MNQPVSHDHK HSHDHAHGDD DHGHAAHGHS CCGSKAAPSL VQLSETASAQ AQLSRFRIDA 
MDCPTEQTLI QDKLGKLAGI EQLEFNLINR VLGVRHTLNG TAEIERAIDS LGMKAEPIAA
EDDGTTSVAQ PAKTRWWPLA LSGIAAITAE IVHFAALAPE WVVAGLALLA ILGCGLGTYK
KGWIALKNRN LNINALMSIA VTGAVLIGQW PEAAMVMVLF TVAELIEARS LDRARNAIGG
LMQLAPDMAT VQQADGLWRE LDVREVAIGA LVRVRPGERI GLDGEVTSGQ SSVDQAPITG
ESLPVEKAVG DKLFAGTINQ AGALEFRVTA AAGQSTLARI IKAVEEAQGA RAPTQRFVDR
FSRIYTPVVF AIALAVAVIP PLFMAGAWFD WVYRALVLLV VACPCALVIS TPVTIVSGLA
AAARKGILIK GGVYLEGGRH LDFLALDKTG TITHGKPVQT DAEVLAPQFE ARAQALAASL
GERSDHPVSR AIAQFGKAQG LALSEVDDFA ALGGRGVRGT IDGEVYHLGN HRLVEELGLC
SPALEAKLDA LERQGKTVVL LLDRSGPLAL FAVADTVKDS SRQAIAELHE LGIKTVMLTG
DNPHTAQAIA AVVGIDRAEG NLLPADKLKT IEALYAEGHR VGMVGDGIND APALARAEIG
FAMAAAGTDT AIETADVALM DDDLRKIPAF VRLSRQSAAI LMQNIVLALG IKAIFLAITF
AGMATMWMAV FADMGVSLLV VFNGLRLLRK