Gene PputGB1_5177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5177 
Symbol 
ID5872992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5788826 
End bp5790022 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content64% 
IMG OID641550315 
Producthypothetical protein 
Protein accessionYP_001671397 
Protein GI167036166 
COG category[R] General function prediction only 
COG ID[COG1092] Predicted SAM-dependent methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTGC CCAGCCTTCG CCTCAAAGCC AATGCCGACC GCCGCCTGCG CGCCGGCCAC 
CTGTGGGTCT ACAGCAACGA AGTCGATGTC AGCGCGACCC CACTGCAAGG CTTTCAGGCC
GGTCAGCAGG CCATTCTCGA GGCCGCCAAC GGCAAGCCGC TGGGCATCGT CGCGCTGAGC
CCGAACAACC TGATCTGCGC CCGCCTGCTG TCGCGCGACA TCAAGCTGCC GCTGGACAAG
TCGCTGCTGG TCCACCGCCT GAACGTTGCC CTGTCGCTGC GCGAGCGCCT GTTCGACCAG
CCGTGCTACC GCCTGGTCTA TGGCGACTCC GACCTGCTGC CGGGCCTGGT GGTCGACCGC
TTCTTCGATA TCCTGGTGGT GCAATTGGCC TCGGCTACCA TGGAAGCGCA CAAGGACGAC
GTGATCGCCG CCCTGGTGCA GGTGCTCAAG CCCAGCGGCA TCCTGTTCAA GAACGACTCC
GCTGCGCGTG ATGCCGAAGG CCTGCAGCGC TACGTCGAGA CCGTCTACGG CGAAGTACCG
GACTGGGTGC CGCTGGAAGA GAACGGCGTC AAGTTCGAAG CCCCGGTGCG CGAAGGCCAG
AAAACCGGCT GGTTCTACGA CCACCGCATG AACCGTGCGC GCCTGGCTCC GTACGTGAAA
GGCAAGCGTG TACTCGACCT GTTCAGCTAC ATCGGTGGCT GGGGTGTGCA GGCCGGCGCC
TTCGGCGCCA GCGAAGTGTT CTGCGTCGAT GCTTCGGGGT TTGCCCTGGA TGGCGTGGAG
CGTAACGCCG CACTCAACGG CATCAGCGAG AAGCTGACCT GCATCGAAGG CGACGTGTTC
GAAGCCCTGC GCGAGCTCAA GGCTGCCGAA GAACGCTTCG ACGTGATCAT TGCCGACCCA
CCCGCCTTCA TCAAGCGCAA GAAGGACCTG AAAAACGGCG AAGCGGCCTA CCGTCGCCTG
AATGAACAGG CCATGCGCAT GCTGAACAAG GACGGCATCC TGGTCAGCGC CTCGTGCTCG
ATGCACTTGC CCGAGGACGA TCTGAACAAC ATCCTGCTGA CCAGCGCCCG CCACCTGGAC
CGCAACCTGC AACTGCTCGA ACGCGGCGGC CAGGGCCCGG ACCACCCGGT GCACCCGGCC
ATCGCCGAAA CCCGCTACAT CAAGAGCATC ACCTGCCGGT TGCTGCCCAA CAGCTGA
 
Protein sequence
MSLPSLRLKA NADRRLRAGH LWVYSNEVDV SATPLQGFQA GQQAILEAAN GKPLGIVALS 
PNNLICARLL SRDIKLPLDK SLLVHRLNVA LSLRERLFDQ PCYRLVYGDS DLLPGLVVDR
FFDILVVQLA SATMEAHKDD VIAALVQVLK PSGILFKNDS AARDAEGLQR YVETVYGEVP
DWVPLEENGV KFEAPVREGQ KTGWFYDHRM NRARLAPYVK GKRVLDLFSY IGGWGVQAGA
FGASEVFCVD ASGFALDGVE RNAALNGISE KLTCIEGDVF EALRELKAAE ERFDVIIADP
PAFIKRKKDL KNGEAAYRRL NEQAMRMLNK DGILVSASCS MHLPEDDLNN ILLTSARHLD
RNLQLLERGG QGPDHPVHPA IAETRYIKSI TCRLLPNS