Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5177 |
Symbol | |
ID | 5872992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5788826 |
End bp | 5790022 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641550315 |
Product | hypothetical protein |
Protein accession | YP_001671397 |
Protein GI | 167036166 |
COG category | [R] General function prediction only |
COG ID | [COG1092] Predicted SAM-dependent methyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCTGC CCAGCCTTCG CCTCAAAGCC AATGCCGACC GCCGCCTGCG CGCCGGCCAC CTGTGGGTCT ACAGCAACGA AGTCGATGTC AGCGCGACCC CACTGCAAGG CTTTCAGGCC GGTCAGCAGG CCATTCTCGA GGCCGCCAAC GGCAAGCCGC TGGGCATCGT CGCGCTGAGC CCGAACAACC TGATCTGCGC CCGCCTGCTG TCGCGCGACA TCAAGCTGCC GCTGGACAAG TCGCTGCTGG TCCACCGCCT GAACGTTGCC CTGTCGCTGC GCGAGCGCCT GTTCGACCAG CCGTGCTACC GCCTGGTCTA TGGCGACTCC GACCTGCTGC CGGGCCTGGT GGTCGACCGC TTCTTCGATA TCCTGGTGGT GCAATTGGCC TCGGCTACCA TGGAAGCGCA CAAGGACGAC GTGATCGCCG CCCTGGTGCA GGTGCTCAAG CCCAGCGGCA TCCTGTTCAA GAACGACTCC GCTGCGCGTG ATGCCGAAGG CCTGCAGCGC TACGTCGAGA CCGTCTACGG CGAAGTACCG GACTGGGTGC CGCTGGAAGA GAACGGCGTC AAGTTCGAAG CCCCGGTGCG CGAAGGCCAG AAAACCGGCT GGTTCTACGA CCACCGCATG AACCGTGCGC GCCTGGCTCC GTACGTGAAA GGCAAGCGTG TACTCGACCT GTTCAGCTAC ATCGGTGGCT GGGGTGTGCA GGCCGGCGCC TTCGGCGCCA GCGAAGTGTT CTGCGTCGAT GCTTCGGGGT TTGCCCTGGA TGGCGTGGAG CGTAACGCCG CACTCAACGG CATCAGCGAG AAGCTGACCT GCATCGAAGG CGACGTGTTC GAAGCCCTGC GCGAGCTCAA GGCTGCCGAA GAACGCTTCG ACGTGATCAT TGCCGACCCA CCCGCCTTCA TCAAGCGCAA GAAGGACCTG AAAAACGGCG AAGCGGCCTA CCGTCGCCTG AATGAACAGG CCATGCGCAT GCTGAACAAG GACGGCATCC TGGTCAGCGC CTCGTGCTCG ATGCACTTGC CCGAGGACGA TCTGAACAAC ATCCTGCTGA CCAGCGCCCG CCACCTGGAC CGCAACCTGC AACTGCTCGA ACGCGGCGGC CAGGGCCCGG ACCACCCGGT GCACCCGGCC ATCGCCGAAA CCCGCTACAT CAAGAGCATC ACCTGCCGGT TGCTGCCCAA CAGCTGA
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Protein sequence | MSLPSLRLKA NADRRLRAGH LWVYSNEVDV SATPLQGFQA GQQAILEAAN GKPLGIVALS PNNLICARLL SRDIKLPLDK SLLVHRLNVA LSLRERLFDQ PCYRLVYGDS DLLPGLVVDR FFDILVVQLA SATMEAHKDD VIAALVQVLK PSGILFKNDS AARDAEGLQR YVETVYGEVP DWVPLEENGV KFEAPVREGQ KTGWFYDHRM NRARLAPYVK GKRVLDLFSY IGGWGVQAGA FGASEVFCVD ASGFALDGVE RNAALNGISE KLTCIEGDVF EALRELKAAE ERFDVIIADP PAFIKRKKDL KNGEAAYRRL NEQAMRMLNK DGILVSASCS MHLPEDDLNN ILLTSARHLD RNLQLLERGG QGPDHPVHPA IAETRYIKSI TCRLLPNS
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