Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5169 |
Symbol | |
ID | 5872984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5781547 |
End bp | 5782212 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641550307 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001671389 |
Protein GI | 167036158 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCCGC GCATGAAGAC CCGAGAGCGC ATCGTGCAGA ACAGCCTGGA GCTGTTCAAC CTGCAGGGCG AACGCAGCGT CAGTACCAAC CACATCGCCG CGCACATGGA AATCTCGCCC GGCAACCTGT ATTACCACTT CCCCAACAAG CAGGCGATCA TTGCCCTGTT GTTCAGCCAG TACGAAGCGC TGGTGGACAG CTTCCTGCGC CCGCCGCAAG GGCGCGCGGC CACCGTGGAG GACAAGCGCT TCTACCTCAA GGCCTTGCTG GCGGCGATGT GGAACTACCG CTTCCTGCAC CGAGACCTTG AGCACCTGCT GGACAGCGAT GCCGAACTGG CCGCCCGTTA TCGGCGTTTT TCCGAGCGTT GCCTGCGCCA GGGCCAGGCG ATCTACCGCG GTTTCGTCGA GGCGGGCATC CTGGCCATGG CGCCGGCGCA GATCGAATCG CTGACCATCA ACGCCTGGAT CGTGCTGACA TCGTGGGTCC GTTTTCTCAG CACCACGCGT GAACATTCCG CGCACCTGGG TGAAGAAGCC TTCAGGCGCG GCGTTTATCA GGTGCTGGTG CTGGAACTCG GCTTTGTCAC TGACAGCGCC CGCACTGCCG TGGACGCGCT GTGCCAGGAA TTCCATGTAC CGTTCAACCA GGCCCTGGAG CATTAG
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Protein sequence | MAPRMKTRER IVQNSLELFN LQGERSVSTN HIAAHMEISP GNLYYHFPNK QAIIALLFSQ YEALVDSFLR PPQGRAATVE DKRFYLKALL AAMWNYRFLH RDLEHLLDSD AELAARYRRF SERCLRQGQA IYRGFVEAGI LAMAPAQIES LTINAWIVLT SWVRFLSTTR EHSAHLGEEA FRRGVYQVLV LELGFVTDSA RTAVDALCQE FHVPFNQALE H
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