Gene PputGB1_5167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5167 
Symbol 
ID5872982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5779652 
End bp5780644 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content64% 
IMG OID641550305 
Productalpha/beta hydrolase fold 
Protein accessionYP_001671387 
Protein GI167036156 
COG category[R] General function prediction only 
COG ID[COG0429] Predicted hydrolase of the alpha/beta-hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGCC TCAGCGCCAC CTTCCGTCCG GCCATCGGCC TGTCCAATCC CCATCTGCAA 
ACGCTGTGGG GGCCACTGTG GCGCAAGCTG CCTGAACTAC AGCGCAACCG CGAGCGGCTG
TGGCTGGCCG ACGGCGACTT CATCGACCTG GACTGGCACG GCCCGCACCA GCCCCATGCG
CCACTGGTGC TCGTGCTGCA TGGGTTGACC GGCTCGTCTC ACTCGCCTTA CGTGAAAGGC
TTGCAGCAAG CGTTGCAAGG TCGCGGCTGG GCCAGCGTGG CGGTGAACTG GCGTGGTTGC
TCAGGCGAGC CCAACCTGTT GCCGCGCAGC TACCATTCCG GCGCCAGCGA AGACCTGGCG
GAAATCATCA GCCACCTGCG CGCCCAACGC CCGTTGGCAC CGCTGTATGC GGTGGGTTAC
TCGCTGGGTG GCAACGTGCT GTTGAAATAC CTGGGCGAGA GCGGCGTTGC CAGCCAACTG
GAAGCCGCGG TTGCAGTGTC GGTGCCATTT CGCCTGGACC ACTGCGCCGA CCGTATCGGC
CAGGGGTTCT CCAAGGTGTA TCAGGCGCAT TTCATGCGCG AGATGCGGGC CTATGTTCAG
CTCAAGCAGC GGCACTTCCA CGACCAGGGC CAGCATGAGC GACTGGCGGC ACTGGAACGC
CTGGGCCAAC TGACCCACTT GCGCACATTC TGGGACTTCG ACGGCAAAGT CACGGCACCG
CTCAACGGCT TTCGCGACGC GCATGACTAC TATCGCCGCT CATCGAGTCA TTATTTCCTT
GGCCAGAACC GCACGCCTAC GCTGATCATC CATTCAAGCG ACGACCCATT CGTGTCCGGC
CATAGCCTGC CAACCGCCCG TGAACTGGCA CCACAGAGCC GCTTCGAACT GCACAGCCGC
GGTGGCCATG TGGGCTTTGT CGATGGCAGC CTGCGAAATC CGGGGTACTA CCTGGAGCGG
CGGATTCCGC AATGGCTGGT GGACGGCCAA TGA
 
Protein sequence
MPSLSATFRP AIGLSNPHLQ TLWGPLWRKL PELQRNRERL WLADGDFIDL DWHGPHQPHA 
PLVLVLHGLT GSSHSPYVKG LQQALQGRGW ASVAVNWRGC SGEPNLLPRS YHSGASEDLA
EIISHLRAQR PLAPLYAVGY SLGGNVLLKY LGESGVASQL EAAVAVSVPF RLDHCADRIG
QGFSKVYQAH FMREMRAYVQ LKQRHFHDQG QHERLAALER LGQLTHLRTF WDFDGKVTAP
LNGFRDAHDY YRRSSSHYFL GQNRTPTLII HSSDDPFVSG HSLPTARELA PQSRFELHSR
GGHVGFVDGS LRNPGYYLER RIPQWLVDGQ