| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5153 |
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| Symbol | trmB |
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| ID | 5872968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5765737 |
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| End bp | 5766459 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641550291 |
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| Product | tRNA (guanine-N(7)-)-methyltransferase |
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| Protein accession | YP_001671373 |
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| Protein GI | 167036142 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0220] Predicted S-adenosylmethionine-dependent methyltransferase |
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| TIGRFAM ID | [TIGR00091] tRNA (guanine-N(7)-)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.323183 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.630661 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGAAT CGCACGATAC GCCGATCACC CCCGACGGCG AAGCTCGCCC GCACCGCCGC
ATCAAGAGCT TCGTGATGCG CGCCGGGCGC ATGACCGAAG GCCAGCAGCG CGGCCTGGAC
CAGGGCGGCC CGCTGTACAT CCTGCCGCTG GCCGACAGCC CGGTGGACTA TGACCAGGTG
TTCGGCCGTT CGGCGCCGCG CACCCTGGAG ATTGGCTTCG GCATGGGCCA TTCCCTGTTG
GAAATGGCCG CTGCCGCGCC TGAACAGGAC TTCATCGGTG TGGAAGTGCA CCGCCCGGGT
GTGGGCGCGC TGCTCAACGG CGTGCTGACC CAGGGGCTGA AGAACCTGCG GGTGTATGAC
TGCGATGCCA TCGAAGTGCT GAACCGCTGC GTGGCGGACA ACAGCCTCGA TCGCCTTATG
CTGTTCTTCC CCGATCCTTG GCACAAGGCG CGTCACCACA AGCGTCGTAT CGTGCAGCTG
GAGTTTGCCG AGCTGGTACG TCGCAAGCTC AAGCCCGGTG GCGTGTTCCA CATGGCCACG
GACTGGGAAC CGTATGCTGA ATACATGCTG GAAGTGATGA GCGCCGCCCC CGGCTACCGC
AACCGTGCGG CCGACGGCAC TTACGTGCCA CGCCCGGAAG AGCGCCCGAT CACCAAGTTC
GAACGCCGCG GCGAGCGGCT GGGGCATGGG GTGTGGGACT TGAAGTTCGA GAAGGTGGAT
TGA
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| Protein sequence | MTESHDTPIT PDGEARPHRR IKSFVMRAGR MTEGQQRGLD QGGPLYILPL ADSPVDYDQV
FGRSAPRTLE IGFGMGHSLL EMAAAAPEQD FIGVEVHRPG VGALLNGVLT QGLKNLRVYD
CDAIEVLNRC VADNSLDRLM LFFPDPWHKA RHHKRRIVQL EFAELVRRKL KPGGVFHMAT
DWEPYAEYML EVMSAAPGYR NRAADGTYVP RPEERPITKF ERRGERLGHG VWDLKFEKVD
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