| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5151 |
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| Symbol | |
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| ID | 5872966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5763574 |
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| End bp | 5764749 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641550289 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_001671371 |
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| Protein GI | 167036140 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.294445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.707101 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCAA CGCTGTCCAC TCCCGGCGCG GTGCGCTTCA CCAGCCTGCC GCCGCTGGCG
CTGTACATCC ACATCCCGTG GTGCGTACGC AAATGCCCTT ACTGCGACTT CAACTCCCAC
GCTGCCGGGC CTGAACTGCC GGAAGACGCC TACGTCACAG CACTGCTGGA CGACCTCGAC
CAGGAACTGG CCGCCGTGCA AGGCCGCCCG ATCAGCTCGA TCTTTTTCGG TGGCGGTACG
CCCAGCCTGT TCAGCGCCAA CGCCCTTGGC CGTTTGCTGC GCGGCGTGGA ACAGCGCATC
CCGTTTGCGC CAGACATCGA AATTACCCTG GAAGCCAACC CAGGCACCTT CGAGCAGGAC
AAGTTCAAGG CCTACCGGCA AACCGGCATC AACCGCCTGT CCATCGGTGT GCAGAGCTTC
CAACCGGCCA AGCTGGAGGC GCTGGGGCGC ATTCACAACG GCGATGAAGC GGTGCGTGCC
GCCGGCATGG CACGCGCCGC CGGCTTCGAC AACTTCAACA TGGACCTGAT GCACGGCCTG
CCCGACCAGT CGCTGGATGA TGCGCTGGGC GACCTGCGCC AGGCCATTGA CCTGGGGCCG
ACGCACCTGT CGTGGTACCA GCTGACCGTG GAACCAAACA CGGTATTCTG GAACCAACCG
CCAGAGCTGC CCGAAGACGA CATCCTCTGG GACATCCAGG AAGCCGGCCA GGCGCTGATG
ACCGAGCACG GTTACCGCCA GTACGAGGTA TCGGCGTATG CGCAGGCAGG CCGCGCCGCC
CGGCACAACC TCAACTACTG GCGCTTCGGC GACTTCATCG GCATCGGTGC AGGTGCCCAC
GGCAAGCTCA CCTTCGCCGA CGGGCGCATC CTGCGCACCT GGAAGACCCG CCTGCCCAAG
GACTACCTGA ACCTGGCCAA GCCGTTCAAG GCCGGCGAGA AGCTATTGCC GGTGGACGAG
CTGCCGTTCG AGTTCCTGAT GAACGCCCTG CGGCTTACCG ATGGCGTGGA AGCCGAACTG
TTTACCCAAC GCACGGGCTT GCCATTGGAA CAACTGCGCG AGGCACGCCG CGCCGCCGAA
CAAAAGGGCC TTTTGCAGGT CGAACCGGAT CGACTGGTGG CCACGCCAAG GGGCCAGTTG
TTCCTCAATG ACCTGCTGCA GTATTTCTTG ACCTAA
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| Protein sequence | MIATLSTPGA VRFTSLPPLA LYIHIPWCVR KCPYCDFNSH AAGPELPEDA YVTALLDDLD
QELAAVQGRP ISSIFFGGGT PSLFSANALG RLLRGVEQRI PFAPDIEITL EANPGTFEQD
KFKAYRQTGI NRLSIGVQSF QPAKLEALGR IHNGDEAVRA AGMARAAGFD NFNMDLMHGL
PDQSLDDALG DLRQAIDLGP THLSWYQLTV EPNTVFWNQP PELPEDDILW DIQEAGQALM
TEHGYRQYEV SAYAQAGRAA RHNLNYWRFG DFIGIGAGAH GKLTFADGRI LRTWKTRLPK
DYLNLAKPFK AGEKLLPVDE LPFEFLMNAL RLTDGVEAEL FTQRTGLPLE QLREARRAAE
QKGLLQVEPD RLVATPRGQL FLNDLLQYFL T
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