| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5143 |
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| Symbol | |
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| ID | 5872958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5757463 |
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| End bp | 5758461 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641550281 |
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| Product | twitching motility protein |
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| Protein accession | YP_001671363 |
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| Protein GI | 167036132 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.847516 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGTGA CTGACCTGTT GGCCCGGGCC GTGGATGCGG GGGCTTCGGA CCTGCACCTG
GCGGCGGGCC AGATACCGAT GCTGCGTTTG GATGGCGAGT TGCAGGGGAT GGATTTGCCG
ACCTTGGGGG CGGATGCCTT GATCGATGGC ATGGCTGCCG TGCTGGATGA CCACCAGCGA
CGACAGTGGG CCCATGGCGA TGAACTGGAT CTGGCGCTGG AGTTACCTGC CCTTGGGCGT
TTTCGGCTGA ACCTGTTTCG CCAATTGAAT GGCCCAGCTG TCACTTTTCG GTTGATTCAG
GGGCGAATTG CCACGCTGGA TGAGCTTGAT CTGGCAGATG TGTTTCAAGC TGTTGCCCAA
TGCCGTGATG GCTTGATCCT GGTGGGCGGG CCGACCGGCA GTGGCAAGTC CAGCACCCTG
GCGACGCTGG TTGATCAACT GAATCGCGAG CGGGCGCTGC ACATCATTAC CCTGGAGGAC
CCTGTCGAAG TTATCCACGG CAGCCAGCGC AGCCTGGTCA ATCAGCGCGA GGTGGGGTGT
CATAGCCACA GCTTTGCTCA GGGGCTACGC AGTGCGCTGC GCCAGGACCC GGATGTGATC
ATGATCGGTG AGTTGCGTGA CCTGGAAACC ATTCGCCTGG CCCTGCGCGC GGCCGAAACC
GGGCATCTGG TGCTGGCAAC CGTGCATGCA CGTTCGGCGG CCAGCAGTAT CGACAGGTTG
GTGGAGGTAT TCGCTGCCGA GGAAAAGCCG TTGGTGCGGG CGATGTTGGC CGAGTCGCTG
CGCCTGGTGG TCGCGCAGGT GCTGGTCAGG CGTGTGGGTG GTGGACGGGT GGCGGCTCGG
GAAGTGCTGG TGGCGACGCC GGCGGTGCGC AATCTGGTTC GGGAGGGGCG GATGGCGCAG
TTGTGTTCGG TGATGCAGGC GGGAGGGGTG GAGGGGATGC GGACGATGGA GGGGGCGATG
CGGGGGTTGA AAGAGAAGGG GCTGATCAAC GACCTGTAG
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| Protein sequence | MDVTDLLARA VDAGASDLHL AAGQIPMLRL DGELQGMDLP TLGADALIDG MAAVLDDHQR
RQWAHGDELD LALELPALGR FRLNLFRQLN GPAVTFRLIQ GRIATLDELD LADVFQAVAQ
CRDGLILVGG PTGSGKSSTL ATLVDQLNRE RALHIITLED PVEVIHGSQR SLVNQREVGC
HSHSFAQGLR SALRQDPDVI MIGELRDLET IRLALRAAET GHLVLATVHA RSAASSIDRL
VEVFAAEEKP LVRAMLAESL RLVVAQVLVR RVGGGRVAAR EVLVATPAVR NLVREGRMAQ
LCSVMQAGGV EGMRTMEGAM RGLKEKGLIN DL
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