| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5138 |
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| Symbol | |
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| ID | 5872953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5751325 |
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| End bp | 5753544 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641550276 |
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| Product | primosome assembly protein PriA |
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| Protein accession | YP_001671358 |
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| Protein GI | 167036127 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCGACG TCATCCTGCG CCTTGCCCTG CCCTCCCCGC TGCGTCGCCT GTTCGACTAC
AAGGCGCCGG CGAGCATGGC ACGCCAGACC TTGACCCCGG GCATGCGCAT TCGCGTGCCC
TTCGGTCGCC GCGAAATGAT CGGCGTGTTG GTGGAGGTGT GCACGCAGAG TGAAGTACCC
GCCGACAAAC TCAAGCCGGC CAGCGCCTTG CTCGACCCGG TGTCCCCCAT CCCGGCGTCG
CTGTTCAAGT TCTGCTTATG GACAGCCCAG TACTACCAGC ACAGCCTGGG CGACACCCTG
AGCTGGGCCT TGCCCACGCT GCTGCGCCAG GGCGAACCCG CTGAAATGCG CCAGGAACGC
TTCTGGCACA TTGCCCCCGG CGCCCGCCTG GAAGACCCGC GCATCGCCCG CGCGCCGCGC
CAGCGCGACG CCCTCAAGAC CCTGGCCCAG CACCCGCACG GCGTGGCCCA CAGCCTGCTG
ACCAAGCTCA ACCTGAACAA GGACAGCCTC GACTTGCTGC TGGCCAAGGA GCTGGTTCAG
ATCGAGGTGC GCCGGCACCT GCCGGCGCTA CGCCATGAGC ACTGGCTGGC ACAGCCAGAA
CTCCCGCTCA ACGAAGAGCA ACGCATTGCC TTCGACGCCG TGCGAGAAGG CTTTGACGGC
TTCGGCGCGT TCCTGCTGGC CGGCGTCACC GGCAGCGGCA AGACCGAGGT CTACCTGCAA
CTGATCCGCG AGACGCTGGA GGCCGGCAAG CAGGCACTGG TGCTGATCCC GGAGATCAAC
CTCGGCCCAC AGACCCTGGC GCGCTTCGAA CAACGCTTCA ATGCCCGCAT CGCCCTGCTG
CATTCGGCGG TCAACGACCG CGAGCGCCTG GACGCCTGGC TGGCCGCTCG CGACGGCGAG
GCCGACATCA TCATCGGCAC CCGCTCGGCA CTGTTCACGC CGATGAAAAA CCCCGGTCTG
ATCATCATCG ACGAGGAGCA CGACGGCTCT TATAAACAGC AGGAAGGGCT GCGCTACCAC
GCCAGAGACC TGGCAATGGT ACGCGCCCAC CAGGAGAACA TCCCGATCCT GCTCGGTTCT
GCCACACCGT CGCTGGAAAC CTTGCATAAC GCCCTTACCG GCCGCTACCG CCTGCTGCGC
ATGAACCAGC GCGCTGGCGG AGCCCGCCCG CCGCGCATGC TGCGCCTGGA TGTAAAGAGC
TTGCCGCTGG ACAGTGGCAT CAGCGGCCCG TTGCAACAAG CCATCCGCCA GACCCTGGAG
GCCGGCCAAC AAGTGCTGGT GTTCCTCAAC CGCCGCGGCT TCGCCCCGAC CCTGCTGTGC
CACGATTGTG GCTGGCTGTC CGAGTGCCCG CGCTGTGATG CGCGCATGAC CGTGCATCAG
CGCTCTGGCG TGCTGCGCTG CCACCACTGC GGCTATGACG AACGCCTGCC GCACCAGTGC
CCGCAGTGCA ATCACGTCGA CCTGCGCCCG GTCGGCGCGG GTACCGAGCG TGCCGAAGAA
CGCCTGAAGG TGCTGTTCCC GGACTACCCG ATCCTGCGCG TGGACCGCGA CAGCACGGCG
CGCAAGGACG CCATGCACAA CCTGTTCAAT ACCATTCAGC GCGGCCAGCC GAGCATCCTT
GTCGGCACGC AGATGCTCGC CAAGGGCCAC CACTTCCCCC GGGTGACCCT GGTGGCCATC
CTCGATGCCG ATGGCGGGCT GTTCTCGGGT GATTTTCGCG CCAGCGAGCG CATGGCGCAG
CTGATCGTAC AGGTAGCCGG ACGGGCCGGG CGGGCCGAAG AGCCCGGCAA GGTCATCATC
CAGACCCACC TGGCCGACCA CCCGCTGCTG GTGCAGTTGA CCGAGCAGGG CTACTTTGCC
TTTGCCGAAC AGGCCCTGGA TGAACGCCGC GCCGCCGGGC TGCCACCTTA CTCCCACCTG
GCCCTGCTGC GTGCCGAAGC GCACAAGCCG GGGCAGGCCG AAGGTTTCCT CGACGAAGCC
TGCGCCGCCG CCGAGCGCCT GGTGGCCGAA CAGCGCCTGC CAGGCATAGA GCTGCTGGGC
CCGGTGCCGG CGCCCATGGA ACGCCGCGCC GGGCGCTACC GCGCGCAACT GTTGATACAG
GCCAATACCC GGGCGCCTTT GCATCGACTG ATCAGCGCCT GGTTGCTAGT GTTGGAGCAA
ATGCCGAGCG GGCGCCAGGT GCGTTGGTCG CTGGACGTCG ACCCGGTCGA CCTGTACTGA
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| Protein sequence | MSDVILRLAL PSPLRRLFDY KAPASMARQT LTPGMRIRVP FGRREMIGVL VEVCTQSEVP
ADKLKPASAL LDPVSPIPAS LFKFCLWTAQ YYQHSLGDTL SWALPTLLRQ GEPAEMRQER
FWHIAPGARL EDPRIARAPR QRDALKTLAQ HPHGVAHSLL TKLNLNKDSL DLLLAKELVQ
IEVRRHLPAL RHEHWLAQPE LPLNEEQRIA FDAVREGFDG FGAFLLAGVT GSGKTEVYLQ
LIRETLEAGK QALVLIPEIN LGPQTLARFE QRFNARIALL HSAVNDRERL DAWLAARDGE
ADIIIGTRSA LFTPMKNPGL IIIDEEHDGS YKQQEGLRYH ARDLAMVRAH QENIPILLGS
ATPSLETLHN ALTGRYRLLR MNQRAGGARP PRMLRLDVKS LPLDSGISGP LQQAIRQTLE
AGQQVLVFLN RRGFAPTLLC HDCGWLSECP RCDARMTVHQ RSGVLRCHHC GYDERLPHQC
PQCNHVDLRP VGAGTERAEE RLKVLFPDYP ILRVDRDSTA RKDAMHNLFN TIQRGQPSIL
VGTQMLAKGH HFPRVTLVAI LDADGGLFSG DFRASERMAQ LIVQVAGRAG RAEEPGKVII
QTHLADHPLL VQLTEQGYFA FAEQALDERR AAGLPPYSHL ALLRAEAHKP GQAEGFLDEA
CAAAERLVAE QRLPGIELLG PVPAPMERRA GRYRAQLLIQ ANTRAPLHRL ISAWLLVLEQ
MPSGRQVRWS LDVDPVDLY
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