| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5133 |
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| Symbol | |
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| ID | 5872948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5744975 |
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| End bp | 5745856 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641550271 |
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| Product | type IV pili biogenesis protein PilM |
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| Protein accession | YP_001671353 |
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| Protein GI | 167036122 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
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| TIGRFAM ID | [TIGR01175] type IV pilus assembly protein PilM |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGGAC GCTTCGGCAA GGATGCCGGT TCACTCGTGG GGGTGGAAAT TGCCCCGGAT
GCCGTTCGCA TGCTGCAACT GCAGCAGCGC AATCGACGCT GGCGGGTGGT GGGGTCGGCA
CAAGAACCGC TTATGGCACC GCTGGGTGAT GATTGGGTGG CGGAGCCTGA TGCAGTGGTG
GCTGCGTTAC AGCGCGCCTA CCAGCGTAGC GGGCTCAAGC AGCGCCGGGT GGCGCTGGCA
TTACCGGCCA GCCAGGTCAT CTGCAAACTG TGCCACCTGC CTGCGCAACA GAACGAAGCG
CAGTTGGAGG CGCGGTTGCT GGCCGATGCT GAGCGGCTGT TTCCGTTTCC ACTGGAAGAC
CTGGCCCTGG ATTTTCAGGT CTTGGGGGCT TCCAGTGTTC AGCCAGGCTG CAGTGAGGTG
ATGGTTGCTG CCTGTCGGCA GAGCGCGCTG GCGTCACTTG AATCAGTGGT CGAGGCGGCG
GGCTTGCAGT TGGAAGCCGT CGAGGTCGAC AACATTGCTT TGTGCCGCAT GTTGCCACGG
GGCGGCTCGG AGGGGGCGGC GTTGTTGCGT GTCGACGCTC GCAGCCTGAC CCTCTATGAC
TGGCTGCCGG GCAGGGTATA CCAGCGCCGT GAGCTGCCAG TCTCCGGTTT GGAGACTAGC
GGGCTGTTGC CAGAGCATTT GCAGGCGCTG CTGACCGACA AAAACCTGCC TGCGGGCTTG
TGGATTAGCA GCAGCTCAGC GATTGACTCA GGCTGGTTGC AAGGGCTTGG CAATCGGCTG
AACCTGCCGT GCAGGTGCCT GCCCGGCCTG ACGGGGCTTG AGCATGTCGA TGGGTCGATG
CTCCTGGCCT GTGCCTTGGC CGTGGGAGGG TTGCGCCCAT GA
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| Protein sequence | MLGRFGKDAG SLVGVEIAPD AVRMLQLQQR NRRWRVVGSA QEPLMAPLGD DWVAEPDAVV
AALQRAYQRS GLKQRRVALA LPASQVICKL CHLPAQQNEA QLEARLLADA ERLFPFPLED
LALDFQVLGA SSVQPGCSEV MVAACRQSAL ASLESVVEAA GLQLEAVEVD NIALCRMLPR
GGSEGAALLR VDARSLTLYD WLPGRVYQRR ELPVSGLETS GLLPEHLQAL LTDKNLPAGL
WISSSSAIDS GWLQGLGNRL NLPCRCLPGL TGLEHVDGSM LLACALAVGG LRP
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