| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5131 |
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| Symbol | |
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| ID | 5872946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5743435 |
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| End bp | 5744445 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641550269 |
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| Product | type IV pili biogenesis protein PilP |
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| Protein accession | YP_001671351 |
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| Protein GI | 167036120 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3167] Tfp pilus assembly protein PilO |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTACTG CACAGCTTCT CGCTTGGTTG GCTGTGGTCG AGCGCTCCGA TCGCTGCCGA
CGACTGGCGC CAGCGCTGGT AGCCGCTGTG TTGTTCAGCC TGGGCTGCGC GATGCGCCTG
CCGGCACTGA TTCAGCAGCA GTCACGCGAG GATGTCAGGT ACGCCGAATT GAATCAGAGG
CAGGCAGCCA GTGCATTGCG GTTGGCCGAG CTTGAGCAGT TGCGGGCTGC TGTGGTGGCC
GCCGAGCAGC GGTTGCAGGA GGCGCGCTGG CAACTGGCTG GCGGGGAGGG CATGAGTGAC
CTGCTTGAGC GCCTGGCGGT GACCGGGCAT GCGCAGGGTT TGCTGGTCGA GCGCCTCGAT
GTCGATAAGG GCGAGCAACA GGCTGGTTTG CGCAAAGTGC CGCTGGAGTT GCAAGTGGTG
GGGCGTTACT CAGCCTTGCG GTTGTGGTTG GACGACTGGT TGGGGCAGGT GCGAGTGCTG
CACAGCGATG ACATGAGCCT GGCTGCCGTT GATCGCCAGC CTGGGCTGTT GCGCCTGCGG
TTGCGGGTTT ATGCCTATGA CGCGCCCGCA CCCATGAAGG CACCTGCGAT GCTGGCGCGG
CTACCGGCAA GGGCTGCAAT GGCTGCGCCT GCCGTAGACC CGTTTGCCCC TGTGGCGGCG
CGGTTGACCG CAACGGGGCT GGCCGGTGTG CCGCTGGCGC AGCTGGAGAT GGTCGGTAGC
CTGGCGCGCG GGGCGGCACG CGAAGCATTG CTGATGGCGG CTGGCAGGCT TTACCGCGTG
CGCCCAGGTG ACCGGGTAGG GCGTGATCAG GGGGTGGTGG CGTACATCGA CCAACGTCAG
GTCGAAGTGC GGGAGCGGCT GTTCATGGCG GGGGAGTGGC ACGAACGCAC GGCGTTCATC
ACCCTTGCCA AGCGCCTGGG CAAGGAGGCC TCGGACCAGA ATGAAAACGT GGATGAAATA
TCTGCTGGCA ACCCTGCTGT CGGTTCCGCT GGCGTCGGCG ACGTCTTATG A
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| Protein sequence | MSTAQLLAWL AVVERSDRCR RLAPALVAAV LFSLGCAMRL PALIQQQSRE DVRYAELNQR
QAASALRLAE LEQLRAAVVA AEQRLQEARW QLAGGEGMSD LLERLAVTGH AQGLLVERLD
VDKGEQQAGL RKVPLELQVV GRYSALRLWL DDWLGQVRVL HSDDMSLAAV DRQPGLLRLR
LRVYAYDAPA PMKAPAMLAR LPARAAMAAP AVDPFAPVAA RLTATGLAGV PLAQLEMVGS
LARGAAREAL LMAAGRLYRV RPGDRVGRDQ GVVAYIDQRQ VEVRERLFMA GEWHERTAFI
TLAKRLGKEA SDQNENVDEI SAGNPAVGSA GVGDVL
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