| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5127 |
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| Symbol | |
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| ID | 5872942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5738907 |
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| End bp | 5740511 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641550265 |
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| Product | sporulation domain-containing protein |
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| Protein accession | YP_001671347 |
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| Protein GI | 167036116 |
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| COG category | [S] Function unknown
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3266] Uncharacterized protein conserved in bacteria
[COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.840723 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGTT TGCATGCCGA TGAGGCCTTT CTCGACCATT ACCAGTTGAG CCACGATCCG
TTCGCGCCCC GCGTGCCCGG TTTCAAGTTC TTCCCGGCCC AGCGCAAGCC CGTGCTCGGC
CAACTGCACC ACCTGGCGCG CTACAGCCAG TTGATGCTGG TGGTCAGCGG CCCGCTGGGC
AGCGGTAAGT CGCTGCTGCG CCAGGCCTTG GTGGCCAGCA CCAACAAACA GGCTGTGCAA
AGTGTGGTGG TGTCTGCCCG CAGCGCCAGC GATGCCTCCA GCATGCTCGC CCACGTCGCC
CAGGACCTTG GTGTGGCCCA GCCTGAAGTG CAGGCGATCC TGTCCAAAGT GGTGCAGCTG
GCACTGACCG GGCAGGAAGT GTATTTGCTG GTGGACGATG CGGAACAACT CGACGAGTCG
GCACTCCAAG CGTTGCTGGA ATTGGCGGCG GGGGTGCCGG AAGGGCGCCC GCACGTGTTC
CTGTTCGGTG AGCCATCGCT GATTGCCGGG CTGGACGAGC TCAATGTCGA GGAAGAACGC
TTCCACATCA TCGAGCTTGC CCCCTACAGT GAGGAAGAAA CCCGCGAATA CCTGGAGCAG
CGCCTGGAGG GCGCCGGCCG GGGCATCGAG GTGTTCAGCC GTGAACAGAT CGCCGATATC
CATGAAAACT CCGACGGTTG GCCTGGCAAT ATCAACCAGG TCGCCCGTGA CACTTTGATC
GAAGCCATGA TCGCCAGCCG CTCGACGGCC AAGCGACCAT CCATGGGGTT CAAGATGCCT
AAAAAACATG TGCTCGCGCT GTCCGCTGTG GTCGTGGTCG CCGTTGCGGC TGCAGTATTG
ATGCCCAAGA AAAGCGACAA GGCCCCCGCC GAAGCGCCAG CCGCCCAGGC TCAGTTGCCA
CTGGGTGACG GCAAGCAGGG CGCTGCCATC GAGTTCTCTG GCTCGTCCCA GCCCATGCCG
CTGCCGCTGG TTGGCCAGTC GCAGCCGGTG ATGCGCGAGC CGTTGGCCCA GGCCGCAGGC
ATGGGCGAGG GTGAAGAAGG CAGCCCGGCA GGTGATACCG CCCTGCAGCC TGGCAACCCA
CCACCTACCG TGACTACCAT CGCGCCGCCG CAAGGTGTGC CGGCAGGCCC GGCCCCCGCG
CCTGCTCAGC CAGTCGCCAG TGCGCCTGTG CAGCCGGTTG CACCTGCGCC AAAGCCTGTT
GCAACCCAGC CCGTAAAACC GGTTGCGCCT GCCAAGCCTG CTCCCGCGCC GACCCAGGTT
GCCGTTGCCA AGCCGGCCGC CAAACCTGCC GAGAAACCAG CGGCCGCTGG CGGTGGCAGC
GGTGGTTGGT ACGCGGGGCA GAAGCCAGGT AATTATGTGG TGCAGATCCT CGGCACCAGC
TCCGAAGCTT CGGCCCAGGC ATACGTCAAG GCCCAGGGTA GCGACTATCG CTACTTCAAG
AAAAACCTGC AGGGCAAGCC ACTGTATGTA GTCACTTACG GCAGCTTCGC CAACCGCGAC
GCAGCGGTTG CAGCAATCAA GAACTTGCCA GCGAAGGTCC AGGCTGGTAA ACCTTGGCCA
CGTACCGTGG GCAGCGTCCA ACAAGAGCTG GCCACGGCCC GCTGA
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| Protein sequence | MTSLHADEAF LDHYQLSHDP FAPRVPGFKF FPAQRKPVLG QLHHLARYSQ LMLVVSGPLG
SGKSLLRQAL VASTNKQAVQ SVVVSARSAS DASSMLAHVA QDLGVAQPEV QAILSKVVQL
ALTGQEVYLL VDDAEQLDES ALQALLELAA GVPEGRPHVF LFGEPSLIAG LDELNVEEER
FHIIELAPYS EEETREYLEQ RLEGAGRGIE VFSREQIADI HENSDGWPGN INQVARDTLI
EAMIASRSTA KRPSMGFKMP KKHVLALSAV VVVAVAAAVL MPKKSDKAPA EAPAAQAQLP
LGDGKQGAAI EFSGSSQPMP LPLVGQSQPV MREPLAQAAG MGEGEEGSPA GDTALQPGNP
PPTVTTIAPP QGVPAGPAPA PAQPVASAPV QPVAPAPKPV ATQPVKPVAP AKPAPAPTQV
AVAKPAAKPA EKPAAAGGGS GGWYAGQKPG NYVVQILGTS SEASAQAYVK AQGSDYRYFK
KNLQGKPLYV VTYGSFANRD AAVAAIKNLP AKVQAGKPWP RTVGSVQQEL ATAR
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